RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 CDCA4Q9BXL8 241 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 TRBV5-5A0A0J9YX44 114 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 A0A1W2PPK0 400 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 TMEM82A0PJX8 343 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 FUOMA2VDF0 154 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 RNASEK-C17orf49H0YIS7 233 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 GABRPO00591 440 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 DEGS1O15121 323 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 NPFFO15130 113 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 HTR3BO95264 441 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 CCL3L1P16619 93 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 TGFBR2P37173 567 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 VHLP40337 213 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 MTNR1BP49286 362 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 ZP1P60852 638 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 SLC9A3R2Q15599 337 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 RNLSQ5VYX0 342 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 ZNF529Q6P280 563 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 TRAPPC6BQ86SZ2 158 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 PXT1Q8NFP0 134 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 THRSPQ92748 146 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 ORAI1Q96D31 301 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 PGLYRP3Q96LB9 341 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 DNHD1Q96M86 4753 aa11.65□□□□□ -0.54
VAMP4-203ENST00000474047 A0A0U1RQK1 487 aa11.65□□□□□ -0.54
VAMP4-203ENST00000474047 hADV38S2A0JD32 116 aa11.65□□□□□ -0.54
VAMP4-203ENST00000474047 MEX3AA1L020 520 aaKnown RBP11.65□□□□□ -0.54
VAMP4-203ENST00000474047 MEIOCA2RUB1 952 aa11.65□□□□□ -0.54
VAMP4-203ENST00000474047 MGST3O14880 152 aa11.65□□□□□ -0.54
VAMP4-203ENST00000474047 RGS10O43665 173 aa11.65□□□□□ -0.54
VAMP4-203ENST00000474047 OR2H2O95918 312 aa11.65□□□□□ -0.54
VAMP4-203ENST00000474047 CSTBP04080 98 aaKnown RBP11.65□□□□□ -0.54
VAMP4-203ENST00000474047 MAPK3P27361 379 aaPredicted RBP11.65□□□□□ -0.54
VAMP4-203ENST00000474047 PTGFRP43088 359 aa11.65□□□□□ -0.54
VAMP4-203ENST00000474047 UBE2E1P51965 193 aa11.65□□□□□ -0.54
VAMP4-203ENST00000474047 ERVFRD-1P60508 538 aa11.65□□□□□ -0.54
VAMP4-203ENST00000474047 BDH1Q02338 343 aa11.65□□□□□ -0.54
VAMP4-203ENST00000474047 MEF2CQ06413 473 aaPredicted RBP11.65□□□□□ -0.54
VAMP4-203ENST00000474047 ZNF273Q14593 569 aa11.65□□□□□ -0.54
VAMP4-203ENST00000474047 SPHARQ15513 63 aa11.65□□□□□ -0.54
VAMP4-203ENST00000474047 TUSC1Q2TAM9 212 aa11.65□□□□□ -0.54
VAMP4-203ENST00000474047 Q6YL49 198 aa11.65□□□□□ -0.54
VAMP4-203ENST00000474047 C17orf107Q6ZR85 190 aa11.65□□□□□ -0.54
VAMP4-203ENST00000474047 METTL9Q9H1A3 318 aa11.65□□□□□ -0.54
VAMP4-203ENST00000474047 PCDHB16Q9NRJ7 776 aa11.65□□□□□ -0.54
VAMP4-203ENST00000474047 CLDN34H7C241 214 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 PSPNO60542 156 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 CRYBA1P05813 215 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 CD1AP06126 327 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 FBP1P09467 338 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 HSMCR30P0CW71 290 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 ZNF728P0DKX0 622 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 OR3A4PP47883 348 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 LGALS4P56470 323 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 RPS11P62280 158 aaKnown RBP eCLIP11.64□□□□□ -0.55
VAMP4-203ENST00000474047 SLC35A2P78381 396 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 ASPHD2Q6ICH7 369 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 PIP4P2Q8N4L2 257 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 CHST4Q8NCG5 386 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 OR4S1Q8NGB4 309 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 OR10K1Q8NGX5 313 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 SSMEM1Q8WWF3 244 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 TNFRSF14Q92956 283 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 ZNF184Q99676 751 aaPredicted RBP11.64□□□□□ -0.55
VAMP4-203ENST00000474047 NKX3-1Q99801 234 aaPredicted RBP11.64□□□□□ -0.55
VAMP4-203ENST00000474047 UNKLQ9H9P5 680 aaKnown RBP11.64□□□□□ -0.55
VAMP4-203ENST00000474047 PAK1IP1Q9NWT1 392 aaPredicted RBP11.64□□□□□ -0.55
VAMP4-203ENST00000474047 ING3Q9NXR8 418 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 BLOC1S6Q9UL45 172 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 RAB26Q9ULW5 256 aa11.64□□□□□ -0.55
VAMP4-203ENST00000474047 BTBD17A6NE02 478 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 CDRT1O95170 752 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 MAS1P04201 325 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 RNASE1P07998 156 aaKnown RBP11.63□□□□□ -0.55
VAMP4-203ENST00000474047 MELTFP08582 738 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 COX7A1P24310 79 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 ACSM1Q08AH1 577 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 ELP2Q6IA86 826 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 C16orf87Q6PH81 154 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 CRIP3Q6Q6R5 217 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 PNKDQ8N490 385 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 JAGN1Q8N5M9 183 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 MS4A15Q8N5U1 240 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 TPRX1Q8N7U7 411 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 SGCDQ92629 289 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 C1orf147Q96MC9 270 aaPredicted RBP11.63□□□□□ -0.55
VAMP4-203ENST00000474047 ZNF714Q96N38 554 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 OR5M11Q96RB7 305 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 TMED9Q9BVK6 235 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 PPA2Q9H2U2 334 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 DPAGT1Q9H3H5 408 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 PRDM13Q9H4Q3 707 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 Q9H521 79 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 FOXJ3Q9UPW0 622 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 TRAV8-7A0A075B6U6 113 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 A0A0G2JK05 382 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 GPX5O75715 221 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 IGFBP3P17936 291 aaPredicted RBP11.63□□□□□ -0.55
VAMP4-203ENST00000474047 SAA4P35542 130 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 OR3A1P47881 315 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms