RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 FABP1P07148 127 aa18.26■□□□□ 0.51
COL18A1-207ENST00000473212 ZNF32P17041 273 aa18.26■□□□□ 0.51
COL18A1-207ENST00000473212 OR2B8PP59922 312 aa18.26■□□□□ 0.51
COL18A1-207ENST00000473212 NIT2Q9NQR4 276 aa18.26■□□□□ 0.51
COL18A1-207ENST00000473212 DOCK7Q96N67 2140 aa18.26■□□□□ 0.51
COL18A1-207ENST00000473212 ONECUT2O95948 504 aa18.26■□□□□ 0.51
COL18A1-207ENST00000473212 IGHV3-9P01782 118 aa18.26■□□□□ 0.51
COL18A1-207ENST00000473212 LMO1P25800 156 aa18.26■□□□□ 0.51
COL18A1-207ENST00000473212 RAB5CP51148 216 aa18.26■□□□□ 0.51
COL18A1-207ENST00000473212 OSR2Q8N2R0 312 aa18.26■□□□□ 0.51
COL18A1-207ENST00000473212 SLC35G3Q8N808 338 aa18.26■□□□□ 0.51
COL18A1-207ENST00000473212 TP53RKQ96S44 253 aa18.26■□□□□ 0.51
COL18A1-207ENST00000473212 SYT3Q9BQG1 590 aa18.26■□□□□ 0.51
COL18A1-207ENST00000473212 ZNF286AQ9HBT8 521 aa18.26■□□□□ 0.51
COL18A1-207ENST00000473212 ST3GAL6Q9Y274 331 aa18.26■□□□□ 0.51
COL18A1-207ENST00000473212 URB1O60287 2271 aaKnown RBP18.26■□□□□ 0.51
COL18A1-207ENST00000473212 TERTO14746 1132 aaKnown RBP18.25■□□□□ 0.51
COL18A1-207ENST00000473212 RFPL3SP0C7P2 107 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 DSCR4P56555 118 aaPredicted RBP18.25■□□□□ 0.51
COL18A1-207ENST00000473212 MRPS34P82930 218 aaKnown RBP18.25■□□□□ 0.51
COL18A1-207ENST00000473212 RAB35Q15286 201 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 MOB3AQ96BX8 217 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 GPHA2Q96T91 129 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 RARRES2Q99969 163 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 ZNF251Q9BRH9 671 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 PBDC1Q9BVG4 233 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 GSN-AS1Q9NRJ2 163 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 METTL1Q9UBP6 276 aaKnown RBP18.25■□□□□ 0.51
COL18A1-207ENST00000473212 WNT16Q9UBV4 365 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 LOC102723996A0A087X1L8 192 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 NRASP01111 189 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 NQO2P16083 231 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 SPINK2P20155 84 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 AADACP22760 399 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 RPS18P62269 152 aaKnown RBP18.25■□□□□ 0.51
COL18A1-207ENST00000473212 LYSMD4Q5XG99 296 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 SLC23A3Q6PIS1 610 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 OR1J1Q8NGS3 322 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 IFI44Q8TCB0 444 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 TCEAL3Q969E4 200 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 DUSP23Q9BVJ7 150 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 BCO1Q9HAY6 547 aa18.25■□□□□ 0.51
COL18A1-207ENST00000473212 SEBOXQ9HB31 216 aaPredicted RBP18.25■□□□□ 0.51
COL18A1-207ENST00000473212 AHCTF1Q8WYP5 2266 aa18.24■□□□□ 0.51
COL18A1-207ENST00000473212 SSR4P51571 173 aa18.24■□□□□ 0.51
COL18A1-207ENST00000473212 EWSR1Q01844 656 aaKnown RBP eCLIP18.24■□□□□ 0.511e-6■■■■■ 31.9
COL18A1-207ENST00000473212 CLINT1Q14677 625 aa18.24■□□□□ 0.51
COL18A1-207ENST00000473212 GNMTQ14749 295 aa18.24■□□□□ 0.51
COL18A1-207ENST00000473212 RHEBQ15382 184 aa18.24■□□□□ 0.51
COL18A1-207ENST00000473212 LHFPL2Q6ZUX7 228 aa18.24■□□□□ 0.51
COL18A1-207ENST00000473212 OR4D5Q8NGN0 318 aa18.24■□□□□ 0.51
COL18A1-207ENST00000473212 OR1F12Q8NHA8 337 aa18.24■□□□□ 0.51
COL18A1-207ENST00000473212 FAM24AA6NFZ4 105 aa18.24■□□□□ 0.51
COL18A1-207ENST00000473212 PATE3B3GLJ2 98 aa18.24■□□□□ 0.51
COL18A1-207ENST00000473212 ZNF587BE7ETH6 402 aa18.24■□□□□ 0.51
COL18A1-207ENST00000473212 GPR37O15354 613 aa18.24■□□□□ 0.51
COL18A1-207ENST00000473212 PMELP40967 661 aa18.24■□□□□ 0.51
COL18A1-207ENST00000473212 ASCL4Q6XD76 172 aa18.24■□□□□ 0.51
COL18A1-207ENST00000473212 ZNF565Q8N9K5 539 aa18.24■□□□□ 0.51
COL18A1-207ENST00000473212 PUS1Q9Y606 427 aaKnown RBP eCLIP18.24■□□□□ 0.51
COL18A1-207ENST00000473212 K7N7A8 449 aa18.23■□□□□ 0.51
COL18A1-207ENST00000473212 IGHV2-5P01817 119 aa18.23■□□□□ 0.51
COL18A1-207ENST00000473212 ITGA3P26006 1051 aa18.23■□□□□ 0.51
COL18A1-207ENST00000473212 HTR5AP47898 357 aa18.23■□□□□ 0.51
COL18A1-207ENST00000473212 HERV-K104P61576 105 aa18.23■□□□□ 0.51
COL18A1-207ENST00000473212 ZNF92Q03936 586 aa18.23■□□□□ 0.51
COL18A1-207ENST00000473212 RPS19BP1Q86WX3 136 aaKnown RBP18.23■□□□□ 0.51
COL18A1-207ENST00000473212 SUMF1Q8NBK3 374 aa18.23■□□□□ 0.51
COL18A1-207ENST00000473212 BOD1Q96IK1 185 aa18.23■□□□□ 0.51
COL18A1-207ENST00000473212 P4HTMQ9NXG6 502 aa18.23■□□□□ 0.51
COL18A1-207ENST00000473212 OR8U8P0C7N1 319 aa18.23■□□□□ 0.51
COL18A1-207ENST00000473212 INTS12Q96CB8 462 aaKnown RBP18.23■□□□□ 0.51
COL18A1-207ENST00000473212 ABHD14AQ9BUJ0 271 aa18.23■□□□□ 0.51
COL18A1-207ENST00000473212 TMED3Q9Y3Q3 217 aa18.23■□□□□ 0.51
COL18A1-207ENST00000473212 NKX2-6A6NCS4 301 aa18.22■□□□□ 0.51
COL18A1-207ENST00000473212 TXNL1O43396 289 aa18.22■□□□□ 0.51
COL18A1-207ENST00000473212 RGS19P49795 217 aa18.22■□□□□ 0.51
COL18A1-207ENST00000473212 CCL20P78556 96 aa18.22■□□□□ 0.51
COL18A1-207ENST00000473212 PSG4Q00888 419 aa18.22■□□□□ 0.51
COL18A1-207ENST00000473212 DAZAP2Q15038 168 aaPredicted RBP18.22■□□□□ 0.51
COL18A1-207ENST00000473212 CCDC71LQ8N9Z2 235 aa18.22■□□□□ 0.51
COL18A1-207ENST00000473212 SH2D2AQ9NP31 389 aa18.22■□□□□ 0.51
COL18A1-207ENST00000473212 CXCL13O43927 109 aa18.22■□□□□ 0.51
COL18A1-207ENST00000473212 OMGP23515 440 aa18.22■□□□□ 0.51
COL18A1-207ENST00000473212 UCP3P55916 312 aa18.22■□□□□ 0.51
COL18A1-207ENST00000473212 B3GALT5-AS1P59052 145 aa18.22■□□□□ 0.51
COL18A1-207ENST00000473212 CALHM1Q8IU99 346 aa18.22■□□□□ 0.51
COL18A1-207ENST00000473212 C3orf80F5H4A9 247 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 CFIP05156 583 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 FGF5P12034 268 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 NPBWR2P48146 333 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 RAC1P63000 192 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 MALLQ13021 153 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 IGSF11Q5DX21 431 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 SOHLH1Q5JUK2 328 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 GPR137CQ8N3F9 429 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 OR2C3Q8N628 320 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 OR2G3Q8NGZ4 309 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 SLAMF9Q96A28 289 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 ZNF442Q9H7R0 627 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms