RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 PRIMA1Q86XR5 153 aa11.72□□□□□ -0.53
BRCA1-211ENST00000472490 FAM185AQ8N0U4 392 aa11.72□□□□□ -0.53
BRCA1-211ENST00000472490 SPARTQ8N0X7 666 aa11.72□□□□□ -0.53
BRCA1-211ENST00000472490 FGFRL1Q8N441 504 aa11.72□□□□□ -0.53
BRCA1-211ENST00000472490 ORAI1Q96D31 301 aa11.72□□□□□ -0.53
BRCA1-211ENST00000472490 SUCNR1Q9BXA5 334 aa11.72□□□□□ -0.53
BRCA1-211ENST00000472490 MS4A7Q9GZW8 240 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-211ENST00000472490 METTL8Q9H825 291 aaKnown RBP11.72□□□□□ -0.53
BRCA1-211ENST00000472490 FN1P02751 2386 aaKnown RBP11.72□□□□□ -0.53
BRCA1-211ENST00000472490 TRAV40A0A0B4J280 105 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 MGST3O14880 152 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 DEGS1O15121 323 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 ZNF737O75373 536 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 HTR3BO95264 441 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 OR2H2O95918 312 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 UCHL1P09936 223 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 CALCBP10092 127 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 GTF2F2P13984 249 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 MMP9P14780 707 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 LMO1P25800 156 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 DUSP1P28562 367 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 SNU13P55769 128 aaKnown RBP11.71□□□□□ -0.53
BRCA1-211ENST00000472490 EDDM3BP56851 147 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 MEF2CQ06413 473 aaPredicted RBP11.71□□□□□ -0.53
BRCA1-211ENST00000472490 IL13RA2Q14627 380 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 GRK1Q15835 563 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 UBE2UQ5VVX9 321 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 ZNF773Q6PK81 442 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 LINC00596Q86U02 117 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 OSR2Q8N2R0 312 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 Q8NFD4 153 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 OR51T1Q8NGJ9 327 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 MRPS24Q96EL2 167 aaKnown RBP11.71□□□□□ -0.53
BRCA1-211ENST00000472490 JMJD8Q96S16 334 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 SIRPDQ9H106 197 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 IL36RNQ9UBH0 155 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 GHRLQ9UBU3 117 aa11.71□□□□□ -0.53
BRCA1-211ENST00000472490 MRPS28Q9Y2Q9 187 aaKnown RBP11.71□□□□□ -0.53
BRCA1-211ENST00000472490 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.71□□□□□ -0.54
BRCA1-211ENST00000472490 hADV38S2A0JD32 116 aa11.7□□□□□ -0.54
BRCA1-211ENST00000472490 CCRL2O00421 344 aa11.7□□□□□ -0.54
BRCA1-211ENST00000472490 CDRT1O95170 752 aa11.7□□□□□ -0.54
BRCA1-211ENST00000472490 CSN2P05814 226 aa11.7□□□□□ -0.54
BRCA1-211ENST00000472490 GALP22466 123 aa11.7□□□□□ -0.54
BRCA1-211ENST00000472490 GUCA2AQ02747 115 aa11.7□□□□□ -0.54
BRCA1-211ENST00000472490 SCN1BQ07699 218 aa11.7□□□□□ -0.54
BRCA1-211ENST00000472490 INSL4Q14641 139 aa11.7□□□□□ -0.54
BRCA1-211ENST00000472490 NHLRC3Q5JS37 347 aa11.7□□□□□ -0.54
BRCA1-211ENST00000472490 KLF17Q5JT82 389 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-211ENST00000472490 NCR3LG1Q68D85 454 aa11.7□□□□□ -0.54
BRCA1-211ENST00000472490 AWAT2Q6E213 333 aa11.7□□□□□ -0.54
BRCA1-211ENST00000472490 METAP1DQ6UB28 335 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-211ENST00000472490 C17orf107Q6ZR85 190 aa11.7□□□□□ -0.54
BRCA1-211ENST00000472490 USP43Q70EL4 1123 aa11.7□□□□□ -0.54
BRCA1-211ENST00000472490 VMO1Q7Z5L0 202 aa11.7□□□□□ -0.54
BRCA1-211ENST00000472490 OR4M1Q8NGD0 313 aa11.7□□□□□ -0.54
BRCA1-211ENST00000472490 NR1H4Q96RI1 486 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-211ENST00000472490 C19orf12Q9NSK7 152 aa11.7□□□□□ -0.54
BRCA1-211ENST00000472490 NDUFB11Q9NX14 153 aa11.7□□□□□ -0.54
BRCA1-211ENST00000472490 NSD1Q96L73 2696 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-211ENST00000472490 A0A0G2JK05 382 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 TMEM82A0PJX8 343 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 MAGEA13PA6NCF6 341 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 H3BUI4 141 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 SIRPB1O00241 398 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 PSPNO60542 156 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 TNFAIP8O95379 198 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 UBBP0CG47 229 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 IGHV4-38-2P0DP08 117 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 SERPINA2P20848 420 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 PSMB9P28065 219 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 ERP29P30040 261 aaKnown RBP11.69□□□□□ -0.54
BRCA1-211ENST00000472490 PSMD7P51665 324 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 RPS25P62851 125 aaKnown RBP11.69□□□□□ -0.54
BRCA1-211ENST00000472490 EDDM3AQ14507 147 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 MPV17LQ2QL34 196 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 SLC22A6Q4U2R8 563 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 FAM27D1Q5T7N8 215 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 TMEM200BQ69YZ2 307 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 GLIPR1L1Q6UWM5 242 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 C9orf139Q6ZV77 190 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 LHX4Q969G2 390 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 MUL1Q969V5 352 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 TBX15Q96SF7 602 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 CHST6Q9GZX3 395 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 UNKLQ9H9P5 680 aaKnown RBP11.69□□□□□ -0.54
BRCA1-211ENST00000472490 VCX3AQ9NNX9 186 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 ST3GAL6Q9Y274 331 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 SF3B6Q9Y3B4 125 aaKnown RBP11.69□□□□□ -0.54
BRCA1-211ENST00000472490 MALRD1Q5VYJ5 2156 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 ABCA2Q9BZC7 2435 aa11.69□□□□□ -0.54
BRCA1-211ENST00000472490 SLC33A1O00400 549 aaPredicted RBP11.68□□□□□ -0.54
BRCA1-211ENST00000472490 RBP4P02753 201 aa11.68□□□□□ -0.54
BRCA1-211ENST00000472490 PRTN3P24158 256 aa11.68□□□□□ -0.54
BRCA1-211ENST00000472490 CALRP27797 417 aaKnown RBP11.68□□□□□ -0.54
BRCA1-211ENST00000472490 KCNJ3P48549 501 aa11.68□□□□□ -0.54
BRCA1-211ENST00000472490 RBM11P57052 281 aaKnown RBP11.68□□□□□ -0.54
BRCA1-211ENST00000472490 FABP5Q01469 135 aa11.68□□□□□ -0.54
BRCA1-211ENST00000472490 TMEM91Q6ZNR0 172 aa11.68□□□□□ -0.54
BRCA1-211ENST00000472490 OR10K1Q8NGX5 313 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms