RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 DHRS7CA6NNS2 312 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 OPN1MWP04001 364 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 OPN1MW2P0DN77 364 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 OPN1MW3P0DN78 364 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 HOXB6P17509 224 aaKnown RBP6.46□□□□□ -1.38
USP48-207ENST00000471752 ATP6V1E1P36543 226 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 ATP1B3P54709 279 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 IL18R1Q13478 541 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 DOC2BQ14184 412 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 ZNF146Q15072 292 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 CDK5R1Q15078 307 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 CNN3Q15417 329 aaKnown RBP6.46□□□□□ -1.38
USP48-207ENST00000471752 AANATQ16613 207 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 SMN1Q16637 294 aaKnown RBP6.46□□□□□ -1.38
USP48-207ENST00000471752 C17orf58Q2M2W7 97 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 C2orf68Q2NKX9 166 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 KPRPQ5T749 579 aaPredicted RBP6.46□□□□□ -1.38
USP48-207ENST00000471752 XAF1Q6GPH4 301 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 TET2Q6N021 2002 aaPredicted RBP6.46□□□□□ -1.38
USP48-207ENST00000471752 ENTHD1Q8IYW4 607 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 CBR4Q8N4T8 237 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 ZNF676Q8N7Q3 588 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 OR13D1Q8NGV5 346 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 OR10K1Q8NGX5 313 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 OR2T6Q8NHC8 308 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 MALSU1Q96EH3 234 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 HRASLS5Q96KN8 279 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 C4orf36Q96KX1 117 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 ZNF714Q96N38 554 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 MNTQ99583 582 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 PDCD1LG2Q9BQ51 273 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 TMEM133Q9H2Q1 129 aa6.46□□□□□ -1.38
USP48-207ENST00000471752 EXOGQ9Y2C4 368 aaKnown RBP6.46□□□□□ -1.38
USP48-207ENST00000471752 TRBV2A0A0J9YWF9 115 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 A0A1W2PPE3 182 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 DAPL1A0PJW8 107 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 LINC01548A6NM66 108 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 LY6LH3BQJ8 138 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 SLC16A6O15403 523 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 CGB3P0DN86 165 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 CGB7P0DN87 165 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 IGLL1P15814 213 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 CDK2P24941 298 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 RBP2P50120 134 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 P2RX3P56373 397 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 ZP1P60852 638 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 ACTR3P61158 418 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 SNRPGP62308 76 aaKnown RBP6.45□□□□□ -1.38
USP48-207ENST00000471752 LPCAT4Q643R3 524 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 FDX2Q6P4F2 183 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 C18orf65Q6ZTR6 163 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 ABHD12Q8N2K0 398 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 OR51A2Q8NGJ7 313 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 RFESDQ8TAC1 157 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 UBALD1Q8TB05 177 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 NDNFQ8TB73 568 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 PLPPR1Q8TBJ4 325 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 APH1BQ8WW43 257 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 R3HDM4Q96D70 268 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 NR1H4Q96RI1 486 aaPredicted RBP6.45□□□□□ -1.38
USP48-207ENST00000471752 ADI1Q9BV57 179 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 NPFFR1Q9GZQ6 430 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 PLEKHA1Q9HB21 404 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 LINC00312Q9Y6C7 94 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 SESN1Q9Y6P5 492 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 DSCAML1Q8TD84 2053 aa6.45□□□□□ -1.38
USP48-207ENST00000471752 TRAV24A0A0B4J272 114 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 hADV38S2A0JD32 116 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 SLC33A1O00400 549 aaPredicted RBP6.44□□□□□ -1.38
USP48-207ENST00000471752 HSPB6O14558 160 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 MGST3O14880 152 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 FBXO24O75426 580 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 GATBO75879 557 aaKnown RBP6.44□□□□□ -1.38
USP48-207ENST00000471752 KDM4BO94953 1096 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 ZFPL1O95159 310 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 SERPINA3P01011 423 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 IGLV1-47P01700 117 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 HTR1AP08908 422 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 PEX2P28328 305 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 KRTAP10-11P60412 298 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 CDC42P60953 191 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 CD83Q01151 205 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 MEF2CQ06413 473 aaPredicted RBP6.44□□□□□ -1.38
USP48-207ENST00000471752 ALKBH1Q13686 389 aaKnown RBP6.44□□□□□ -1.38
USP48-207ENST00000471752 ATXN7L3Q14CW9 347 aaPredicted RBP6.44□□□□□ -1.38
USP48-207ENST00000471752 ZSCAN26Q16670 478 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 SLC25A30Q5SVS4 291 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 TMEM244Q5VVB8 128 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 CCDC121Q6ZUS5 278 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 UTS2BQ765I0 119 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 DNAAF1Q8NEP3 725 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 OR5AU1Q8NGC0 362 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 OR13A1Q8NGR1 328 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 OR13C3Q8NGS6 347 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 RHOXF1Q8NHV9 184 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 ITFG2Q969R8 447 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 OPALINQ96PE5 141 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 PRRG3Q9BZD7 231 aa6.44□□□□□ -1.38
USP48-207ENST00000471752 RANBP3Q9H6Z4 567 aaPredicted RBP6.44□□□□□ -1.38
USP48-207ENST00000471752 HHLA2Q9UM44 414 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms