RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 BCKDKO14874 412 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 ZBTB5O15062 677 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 RGS5O15539 181 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 FCN3O75636 299 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 CRTAPO75718 401 aaPredicted RBP0.27□□□□□ -2.37
UBXN4-207ENST00000471246 CIB2O75838 187 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 UPK1BO75841 260 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 SMC2O95347 1197 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 IGKV1D-33P01593 117 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 IGKV1-33P01594 117 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 KRT14P02533 472 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 IFNW1P05000 195 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 HOXB8P17481 243 aaPredicted RBP0.27□□□□□ -2.37
UBXN4-207ENST00000471246 CRABP2P29373 138 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 HMOX2P30519 316 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 RAB11AP62491 216 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 ITIH4Q14624 930 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 ELOCQ15369 112 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 CST6Q15828 149 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 BCL2A1Q16548 175 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 TMEM241Q24JQ0 296 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 DEFB115Q30KQ5 88 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 ARMC12Q5T9G4 340 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 TWF2Q6IBS0 349 aaKnown RBP0.27□□□□□ -2.37
UBXN4-207ENST00000471246 NOXRED1Q6NXP6 359 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 Q6ZRU5 148 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 FAM231DQ6ZW35 169 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 LYZL2Q7Z4W2 148 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 HS3ST5Q8IZT8 346 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 LINC00337Q8N6G1 96 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 CYB561A3Q8NBI2 242 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 ZNF738Q8NE65 137 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 OR4C5Q8NGB2 326 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 OR8K1Q8NGG5 319 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 OR2K2Q8NGT1 345 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 OR2V1Q8NHB1 315 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 GPR119Q8TDV5 335 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 LMX1AQ8TE12 382 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 BLNKQ8WV28 456 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 BAALCQ8WXS3 180 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 APOBEC3DQ96AK3 386 aaPredicted RBP0.27□□□□□ -2.37
UBXN4-207ENST00000471246 UBE2WQ96B02 151 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 RCN3Q96D15 328 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 PANX1Q96RD7 426 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 NAPGQ99747 312 aaPredicted RBP0.27□□□□□ -2.37
UBXN4-207ENST00000471246 AGMATQ9BSE5 352 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 GABARAPL1Q9H0R8 117 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 ARV1Q9H2C2 271 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 KIR3DX1Q9H7L2 352 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 REEP1Q9H902 201 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 MCUBQ9NWR8 336 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 OR5V1Q9UGF6 321 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 AMMECR1Q9Y4X0 333 aaPredicted RBP0.27□□□□□ -2.37
UBXN4-207ENST00000471246 FADS3Q9Y5Q0 445 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 ZNF780BQ9Y6R6 833 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 AKAP9Q99996 3911 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 KIAA0100Q14667 2235 aaKnown RBP0.27□□□□□ -2.37
UBXN4-207ENST00000471246 PKHD1P08F94 4074 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 KNL1Q8NG31 2342 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 NPHP4O75161 1426 aaPredicted RBP0.27□□□□□ -2.37
UBXN4-207ENST00000471246 C10orf71Q711Q0 1435 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 TCOF1Q13428 1488 aaKnown RBP0.27□□□□□ -2.37
UBXN4-207ENST00000471246 SLIT1O75093 1534 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 DISP1Q96F81 1524 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 THOC2Q8NI27 1593 aaKnown RBP0.27□□□□□ -2.37
UBXN4-207ENST00000471246 DICER1Q9UPY3 1922 aaKnown RBP0.26□□□□□ -2.37
UBXN4-207ENST00000471246 LRP1BQ9NZR2 4599 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 ARHGAP32A7KAX9 2087 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 CACNA1CQ13936 2221 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 DNAH1Q9P2D7 4330 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 IGKV1D-37A0A075B6S9 117 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 KCNE1BA0A087WTH5 132 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 A0A0B4J2E0 115 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 A6NED7 52 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 KNCNA6PVL3 124 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 F5H5P2 479 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 UPK1AO00322 258 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 NDUFS5O43920 106 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 MPDU1O75352 247 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 PSIP1O75475 530 aaKnown RBP0.26□□□□□ -2.37
UBXN4-207ENST00000471246 OR2A4O95047 310 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 TTC4O95801 387 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 OPN1SWP03999 348 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 CATP04040 527 aaKnown RBP0.26□□□□□ -2.37
UBXN4-207ENST00000471246 ERCC1P07992 297 aaPredicted RBP0.26□□□□□ -2.37
UBXN4-207ENST00000471246 KRT16P08779 473 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 TACSTD2P09758 323 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 CGB3P0DN86 165 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 CGB7P0DN87 165 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 MLNP12872 115 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 GFAPP14136 432 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 PAX6P26367 422 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 BLVRBP30043 206 aaPredicted RBP0.26□□□□□ -2.37
UBXN4-207ENST00000471246 COILP38432 576 aaPredicted RBP0.26□□□□□ -2.37
UBXN4-207ENST00000471246 MAGEA6P43360 314 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 PSMB2P49721 201 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 SLC18A1P54219 525 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 RGS8P57771 180 aaPredicted RBP0.26□□□□□ -2.37
UBXN4-207ENST00000471246 RPS15P62841 145 aaKnown RBP0.26□□□□□ -2.37
UBXN4-207ENST00000471246 RPL10AP62906 217 aaKnown RBP0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms