RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 B3GALT5Q9Y2C3 310 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 MRPS28Q9Y2Q9 187 aaKnown RBP4.25□□□□□ -1.73
SF3B1-207ENST00000468925 TMED7Q9Y3B3 224 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 PTRH2Q9Y3E5 179 aaKnown RBP4.25□□□□□ -1.73
SF3B1-207ENST00000468925 WDR45Q9Y484 360 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 URGCP-MRPS24S4R325 110 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 TMEM56-RWDD3S4R434 201 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 MCM3APO60318 1980 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 NPIPA5A0A0B4J1W7 369 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 A6NNC1 897 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF727A8MUV8 499 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 NPIPA5E9PKD4 350 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 C17orf112F2Z3M2 114 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 NPIPA3F8WFD2 350 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 CDC42EP2O14613 210 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 FGF17O60258 216 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 YPEL1O60688 119 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 UPK3AO75631 287 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 CDS2O95674 445 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 TXNDC12O95881 172 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 EPPINO95925 133 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 MAS1P04201 325 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 LGALS2P05162 132 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 PCCBP05166 539 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 CTSDP07339 412 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-207ENST00000468925 MRPL3P09001 348 aaKnown RBP4.24□□□□□ -1.73
SF3B1-207ENST00000468925 TMIGD3P0DMS9 266 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-207ENST00000468925 BCL2P10415 239 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 CSNK2A2P19784 350 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-207ENST00000468925 FUT3P21217 361 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 GLRA1P23415 457 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 CD1BP29016 333 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 SERPINA4P29622 427 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 GABRA3P34903 492 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 PSMB10P40306 273 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 APOBEC1P41238 236 aaKnown RBP4.24□□□□□ -1.73
SF3B1-207ENST00000468925 GALR1P47211 349 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 NPBWR2P48146 333 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 ELLP55199 621 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-207ENST00000468925 CLDN6P56747 220 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 RHOAP61586 193 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 RPL11P62913 178 aaKnown RBP4.24□□□□□ -1.73
SF3B1-207ENST00000468925 SERF2P84101 59 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 DLX2Q07687 328 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-207ENST00000468925 Q0VG73 95 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 FOXF1Q12946 379 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 FOXL1Q12952 345 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 HSPB3Q12988 150 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 EIF2B1Q14232 305 aaKnown RBP4.24□□□□□ -1.73
SF3B1-207ENST00000468925 SHBQ15464 509 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 SLC9A3R2Q15599 337 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 CEBPEQ15744 281 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 VAMP3Q15836 100 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 HIST3H3Q16695 136 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 PCK2Q16822 640 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 SNAI3Q3KNW1 292 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 ARHGAP11BQ3KRB8 267 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 KHDC1LQ5JSQ8 128 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 ATXN7L2Q5T6C5 722 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-207ENST00000468925 TPTE2P1Q5T6R2 138 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 FAM162BQ5T6X4 162 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 SAMD13Q5VXD3 122 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF343Q6P1L6 599 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 KCTD18Q6PI47 426 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-207ENST00000468925 C12orf54Q6X4T0 127 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 DEFB128Q7Z7B8 93 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 VASH2Q86V25 355 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 LHFPL1Q86WI0 220 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 KMT5CQ86Y97 462 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 C1orf174Q8IYL3 243 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 RAB42Q8N4Z0 105 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 C12orf76Q8N812 135 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-207ENST00000468925 CYB561D1Q8N8Q1 229 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 OR4N2Q8NGD1 307 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 OR52L2PQ8NGH6 319 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 OR1L6Q8NGR2 347 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 OR13C9Q8NGT0 318 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 OR5H2Q8NGV7 314 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 ABHD3Q8WU67 409 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 TMEM255BQ8WV15 326 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 TSEN15Q8WW01 171 aaKnown RBP4.24□□□□□ -1.73
SF3B1-207ENST00000468925 MBD3L1Q8WWY6 194 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 BCL2L2Q92843 193 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-207ENST00000468925 IGSF8Q969P0 613 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 ZMYND19Q96E35 227 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-207ENST00000468925 YPEL2Q96QA6 119 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 ATP6V0BQ99437 205 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 TPSD1Q9BZJ3 242 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 ATG10Q9H0Y0 220 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF703Q9H7S9 590 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-207ENST00000468925 PLEKHF2Q9H8W4 249 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 WDR76Q9H967 626 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 TXNRD2Q9NNW7 524 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 G6PC2Q9NQR9 355 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 FBXO34Q9NWN3 711 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 ELOVL5Q9NYP7 299 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 AK3Q9UIJ7 227 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 NPIPA1Q9UND3 350 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 TIMM13Q9Y5L4 95 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-207ENST00000468925 OR51B2Q9Y5P1 312 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms