RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 C1orf147Q96MC9 270 aaPredicted RBP11.97□□□□□ -0.49
DNMT3A-208ENST00000466601 DCTN5Q9BTE1 182 aa11.97□□□□□ -0.49
DNMT3A-208ENST00000466601 FAM234AQ9H0X4 552 aa11.97□□□□□ -0.49
DNMT3A-208ENST00000466601 PLGRKTQ9HBL7 147 aa11.97□□□□□ -0.49
DNMT3A-208ENST00000466601 DOCK11Q5JSL3 2073 aa11.97□□□□□ -0.49
DNMT3A-208ENST00000466601 ZANQ9Y493 2812 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 TMEM82A0PJX8 343 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 SIRPB1O00241 398 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 SLC17A2O00624 439 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 DEGS1O15121 323 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 SLC22A1O15245 554 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 UBBP0CG47 229 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 RAB3BP20337 219 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 GABRR1P24046 479 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 LMO1P25800 156 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 PIGYQ3MUY2 71 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 TIMM50Q3ZCQ8 353 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 NHLRC3Q5JS37 347 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 GDPGP1Q6ZNW5 385 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 C17orf107Q6ZR85 190 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 OR5D13Q8NGL4 314 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 KCTD7Q96MP8 289 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 TMPRSS13Q9BYE2 586 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 C7orf69Q9H7B7 122 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 RPUSD1Q9UJJ7 312 aaKnown RBP11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 ST3GAL6Q9Y274 331 aa11.96□□□□□ -0.49
DNMT3A-208ENST00000466601 A0A0G2JK05 382 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 PSPNO60542 156 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 LIPFP07098 398 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 RBM11P57052 281 aaKnown RBP11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 OR10A3P58181 314 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 PAX8Q06710 450 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 RAB11BQ15907 218 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 FAM120AOSQ5T036 256 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 OR8H2Q8N162 312 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 CHST4Q8NCG5 386 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 LY6G5BQ8NDX9 201 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 OR4S1Q8NGB4 309 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 OR13F1Q8NGS4 319 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 PPP1R35Q8TAP8 253 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 SLC25A28Q96A46 364 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 MRPS24Q96EL2 167 aaKnown RBP11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 CENPOQ9BU64 300 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 MRI1Q9BV20 369 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 CHST6Q9GZX3 395 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 SHARPINQ9H0F6 387 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 BANF2Q9H503 90 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 RNF167Q9H6Y7 350 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 AUP1Q9Y679 476 aa11.95□□□□□ -0.5
DNMT3A-208ENST00000466601 SLC33A1O00400 549 aaPredicted RBP11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 GEMIN2O14893 280 aaKnown RBP11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 AIREO43918 545 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 CRTAPO75718 401 aaPredicted RBP11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 AVPP01185 164 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 TFAP2AP05549 437 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 PPIAL4GP0DN37 164 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 VSIG8P0DPA2 414 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 MGMTP16455 207 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 RANBP1P43487 201 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 ALDH3B2P48448 385 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 P2RY14Q15391 338 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 GRK1Q15835 563 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 MPV17LQ2QL34 196 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 HES5Q5TA89 166 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 GDPD3Q7L5L3 318 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 LINC00596Q86U02 117 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 TPRA1Q86W33 373 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 TMEM104Q8NE00 496 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 C8orf46Q8TAG6 207 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 FUNDC2Q9BWH2 189 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 SELENOIQ9C0D9 397 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 CST11Q9H112 138 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 LPAR3Q9UBY5 353 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 OPN4Q9UHM6 478 aa11.94□□□□□ -0.5
DNMT3A-208ENST00000466601 TRBV23-1A0A0A0MS06 115 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 A0A1W2PQ09 198 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 SMIM30A4D0T7 59 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 IFITM5A6NNB3 132 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 MGST3O14880 152 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 OR7C1O76099 320 aaPredicted RBP11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 BPNT1O95861 308 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 MPIG6BO95866 241 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 ARSBP15848 533 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 HNF1AP20823 631 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 SDC2P34741 201 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 OR3A1P47881 315 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 CLDN12P56749 244 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 EDDM3BP56851 147 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 RPL31P62899 125 aaKnown RBP11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 EDDM3AQ14507 147 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 TAF9Q16594 264 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 OR10K2Q6IF99 312 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 C1orf229Q6ZS94 237 aaPredicted RBP11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 IL17RELQ6ZVW7 336 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 NR2C2APQ86WQ0 139 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 FAM185AQ8N0U4 392 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 OR4M1Q8NGD0 313 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 KCNG3Q8TAE7 436 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 FAM46BQ96A09 425 aa11.93□□□□□ -0.5
DNMT3A-208ENST00000466601 DMRTB1Q96MA1 342 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms