RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 OR2V2Q96R30 315 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 VRK1Q99986 396 aaPredicted RBP14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 GINS4Q9BRT9 223 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 RTL8AQ9BWD3 113 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 SELENOIQ9C0D9 397 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 SLC2A8Q9NY64 477 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 IL19Q9UHD0 177 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 ITPR2Q14571 2701 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 MEIKINA0A087WXM9 373 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 OR5B21A6NL26 309 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 OVOL3O00110 214 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 CRTAPO75718 401 aaPredicted RBP14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 CD55P08174 381 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 HIST1H1DP16402 221 aaKnown RBP14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 CD200P41217 278 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 RBP2P50120 134 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 MTCP1P56278 107 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 ZP1P60852 638 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 TNFAIP6P98066 277 aaPredicted RBP14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 FAM209AQ5JX71 171 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 ASCL4Q6XD76 172 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 TRAPPC6BQ86SZ2 158 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 BORCS8Q96FH0 119 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 MEGF10Q96KG7 1140 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 S100A13Q99584 98 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 ZMAT3Q9HA38 289 aaKnown RBP14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 MYOZ1Q9NP98 299 aaPredicted RBP14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 SCP2D1Q9UJQ7 156 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 NPTNQ9Y639 398 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 FAM172BPA6NC97 362 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 FOXI3A8MTJ6 420 aaPredicted RBP14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 SSNA1O43805 119 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 CA11O75493 328 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 PTBP3O95758 552 aaKnown RBP14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 HPXP02790 462 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 ZNF735P0CB33 412 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 NAT1P18440 290 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 TNFSF4P23510 183 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 CBX5P45973 191 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 TMEM50BP56557 158 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 MZT1Q08AG7 82 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 SLC22A6Q4U2R8 563 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 SLC36A1Q7Z2H8 476 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 SPICQ8N5J4 248 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 ITLN1Q8WWA0 313 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 HYLS1Q96M11 299 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 NICN1Q9BSH3 213 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 OR51I2Q9H344 312 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 ELF5Q9UKW6 265 aaPredicted RBP14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 ING4Q9UNL4 249 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 BAHCC1Q9P281 2608 aa14.3□□□□□ -0.12
EXOSC3-203ENST00000465229 DISC1C4P0D8 188 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 MFNGO00587 321 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 RGS13O14921 159 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 CREBL2O60519 120 aaPredicted RBP14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 GRPP07492 148 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 MGMTP16455 207 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 GNB3P16520 340 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 CDKN1AP38936 164 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 ATP1B3P54709 279 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 ZNF154Q13106 437 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 CDK10Q15131 360 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 MPPED2Q15777 294 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 PRAMEF6Q5VXH4 476 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 ZNF626Q68DY1 528 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 C1QL2Q7Z5L3 287 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 BEST4Q8NFU0 473 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 ZFAND1Q8TCF1 268 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 DACT3Q96B18 629 aaPredicted RBP14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 CCL19Q99731 98 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 PRRT1Q99946 306 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 BANF2Q9H503 90 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 RANBP3Q9H6Z4 567 aaPredicted RBP14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 DECR2Q9NUI1 292 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 PLEKHA6Q9Y2H5 1048 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 ARID1AO14497 2285 aa14.29□□□□□ -0.12
EXOSC3-203ENST00000465229 TMEM210A6NLX4 147 aa14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 SOCS1O15524 211 aa14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 SSX5O60225 188 aa14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 ZNF780AO75290 641 aaPredicted RBP14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 ANXA7P20073 488 aaKnown RBP14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 CPT2P23786 658 aa14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 HAAOP46952 286 aa14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 GNG2P59768 71 aa14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 PLAC9Q5JTB6 97 aa14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 ZNF573Q86YE8 665 aa14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 CALHM1Q8IU99 346 aa14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 C11orf53Q8IXP5 236 aa14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 OR51T1Q8NGJ9 327 aa14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 CAPSLQ8WWF8 208 aa14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 POM121Q96HA1 1249 aa14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 OCSTAMPQ9BR26 566 aa14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 RAB1BQ9H0U4 201 aa14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 IFT46Q9NQC8 304 aa14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 KCNK7Q9Y2U2 307 aa14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 CSMD2Q7Z408 3487 aa14.28□□□□□ -0.12
EXOSC3-203ENST00000465229 A0A1W2PP11 408 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 LRP5LA4QPB2 252 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 TPD52L2O43399 206 aaKnown RBP14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 AMY2AP04746 511 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms