RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 TPK1Q9H3S4 243 aa3.95□□□□□ -1.78
COPS3-205ENST00000463097 MRPL40Q9NQ50 206 aaKnown RBP3.95□□□□□ -1.78
COPS3-205ENST00000463097 DMAC2Q9NW81 257 aa3.95□□□□□ -1.78
COPS3-205ENST00000463097 RBFOX1Q9NWB1 397 aaKnown RBP3.95□□□□□ -1.78
COPS3-205ENST00000463097 DDIT4Q9NX09 232 aa3.95□□□□□ -1.78
COPS3-205ENST00000463097 HES2Q9Y543 173 aa3.95□□□□□ -1.78
COPS3-205ENST00000463097 AKAP11Q9UKA4 1901 aa3.95□□□□□ -1.78
COPS3-205ENST00000463097 TNS3Q68CZ2 1445 aa3.95□□□□□ -1.78
COPS3-205ENST00000463097 DUOX1Q9NRD9 1551 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 DOCK2Q92608 1830 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 KIF13BQ9NQT8 1826 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 A0A0G2JND7 137 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 I3L4J1 428 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 TNFRSF11BO00300 401 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 MYL12BO14950 172 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 AQP9O43315 295 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 SRSF10O75494 262 aaKnown RBP3.94□□□□□ -1.78
COPS3-205ENST00000463097 GLSO94925 669 aaPredicted RBP3.94□□□□□ -1.78
COPS3-205ENST00000463097 TRBV12-3P01733 135 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 POLR2IP36954 125 aaKnown RBP3.94□□□□□ -1.78
COPS3-205ENST00000463097 PSMD8P48556 350 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 TMBIM6P55061 237 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 PIGHQ14442 188 aaPredicted RBP3.94□□□□□ -1.78
COPS3-205ENST00000463097 C16orf72Q14CZ0 275 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 IRF4Q15306 451 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 TMED2Q15363 201 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 TRIP13Q15645 432 aaPredicted RBP3.94□□□□□ -1.78
COPS3-205ENST00000463097 PLEKHG7Q6ZR37 379 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 SSX7Q7RTT5 188 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 MRPL52Q86TS9 123 aaKnown RBP3.94□□□□□ -1.78
COPS3-205ENST00000463097 ZNF429Q86V71 674 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 PLCZ1Q86YW0 608 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 C12orf56Q8IXR9 622 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 SLC34A3Q8N130 599 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 OR8G5Q8NG78 346 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 OR1S1Q8NH92 325 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 BLOC1S5Q8TDH9 187 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 ANKRD9Q96BM1 317 aaPredicted RBP3.94□□□□□ -1.78
COPS3-205ENST00000463097 DCUN1D1Q96GG9 259 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 FAM210BQ96KR6 192 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 ZNF488Q96MN9 340 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 EMC6Q9BV81 110 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 SAMD10Q9BYL1 202 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 SLC38A10Q9HBR0 1119 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 HEBP1Q9NRV9 189 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 ARMC1Q9NVT9 282 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 IL20Q9NYY1 176 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 POMPQ9Y244 141 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 NUP188Q5SRE5 1749 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 UBR1Q8IWV7 1749 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 C5P01031 1676 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 ADAMTSL3P82987 1691 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 KIF1AQ12756 1690 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 PLCH1Q4KWH8 1693 aa3.94□□□□□ -1.78
COPS3-205ENST00000463097 AFDNP55196 1824 aaKnown RBP3.93□□□□□ -1.78
COPS3-205ENST00000463097 ARAP2Q8WZ64 1704 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 MYH10P35580 1976 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 TRAV19A0A0A6YYK7 116 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 IGHV3-64DA0A0J9YX35 117 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 CCDC160A6NGH7 325 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 ACOX3O15254 700 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 SLC25A14O95258 325 aaPredicted RBP3.93□□□□□ -1.78
COPS3-205ENST00000463097 ZNF17P17021 662 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 HLA-GP17693 338 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 PAX6P26367 422 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 CYP24A1Q07973 514 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 CDC20Q12834 499 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 TRAM1Q15629 374 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 TOMM34Q15785 309 aaPredicted RBP3.93□□□□□ -1.78
COPS3-205ENST00000463097 RBM48Q5RL73 367 aaKnown RBP3.93□□□□□ -1.78
COPS3-205ENST00000463097 TMEM236Q5W0B7 351 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 KDM4DQ6B0I6 523 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 HBMQ6B0K9 141 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 NANOGP8Q6NSW7 305 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 TIFABQ6ZNK6 161 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 FAM92BQ6ZTR7 304 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 LGI3Q8N145 548 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 NECAP1Q8NC96 275 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 SFXN5Q8TD22 340 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 DCAKDQ8WVC6 231 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 S100ZQ8WXG8 99 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 PTX4Q96A99 478 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 SFXN3Q9BWM7 321 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 NOX3Q9HBY0 568 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 DIABLOQ9NR28 239 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 NLE1Q9NVX2 485 aaPredicted RBP3.93□□□□□ -1.78
COPS3-205ENST00000463097 SIGLEC7Q9Y286 467 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 SCN11AQ9UI33 1791 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 DCCP43146 1447 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 GLI3P10071 1580 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 CLUHO75153 1309 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 IGSF9BQ9UPX0 1349 aa3.93□□□□□ -1.78
COPS3-205ENST00000463097 IGLV3-10A0A075B6K4 115 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 IGKV1-27A0A075B6S5 117 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 TRAV8-6A0A0B4J262 113 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 IGHV5-51A0A0C4DH38 117 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 ISPDA4D126 451 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 GOLGA8IPA6NC78 632 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 FABP12A6NFH5 140 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 GOLGA8MH3BSY2 632 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms