RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 ZNF2Q9BSG1 426 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC3-205ENST00000462715 MMP25Q9NPA2 562 aa10.04□□□□□ -0.8
TRAPPC3-205ENST00000462715 C1orf123Q9NWV4 160 aa10.04□□□□□ -0.8
TRAPPC3-205ENST00000462715 PRR32B1ATL7 298 aa10.04□□□□□ -0.8
TRAPPC3-205ENST00000462715 HSBP1L1C9JCN9 74 aa10.04□□□□□ -0.8
TRAPPC3-205ENST00000462715 CCL11P51671 97 aa10.04□□□□□ -0.8
TRAPPC3-205ENST00000462715 PRPS1P60891 318 aa10.04□□□□□ -0.8
TRAPPC3-205ENST00000462715 SELENOTP62341 195 aa10.04□□□□□ -0.8
TRAPPC3-205ENST00000462715 EXOSC6Q5RKV6 272 aaKnown RBP10.04□□□□□ -0.8
TRAPPC3-205ENST00000462715 LEMD1Q68G75 181 aa10.04□□□□□ -0.8
TRAPPC3-205ENST00000462715 COX18Q8N8Q8 333 aa10.04□□□□□ -0.8
TRAPPC3-205ENST00000462715 APCDD1LQ8NCL9 501 aa10.04□□□□□ -0.8
TRAPPC3-205ENST00000462715 OR4S1Q8NGB4 309 aa10.04□□□□□ -0.8
TRAPPC3-205ENST00000462715 TSEN15Q8WW01 171 aaKnown RBP10.04□□□□□ -0.8
TRAPPC3-205ENST00000462715 THOC3Q96J01 351 aaKnown RBP10.04□□□□□ -0.8
TRAPPC3-205ENST00000462715 SDF2Q99470 211 aa10.04□□□□□ -0.8
TRAPPC3-205ENST00000462715 PCSK5Q92824 1860 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 A0A1W2PS29 197 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 RPP14O95059 124 aaKnown RBP10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 PPBPP02775 128 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 PRH1P02810 166 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 PGA4P0DJD7 388 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 PGA5P0DJD9 388 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 TMEM225BP0DP42 221 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 HRH1P35367 487 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 MRPL2Q5T653 305 aaKnown RBP10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 DPPA3Q6W0C5 159 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 FAM219AQ8IW50 185 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 NFAM1Q8NET5 270 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 SLC26A10Q8NG04 563 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 OR2D3Q8NGH3 330 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 OR1N1Q8NGS0 311 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 OR6K6Q8NGW6 343 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 MARCH1Q8TCQ1 289 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 C5orf66Q9H5L9 145 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 WDR76Q9H967 626 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 MASP2O00187 686 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 SIAH2O43255 324 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 HBE1P02100 147 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 S100A10P60903 97 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 Q0VFX4 171 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 FAM189A2Q15884 450 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 TAF9Q16594 264 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 TMEM225Q6GV28 225 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 CPEB3Q8NE35 698 aaKnown RBP10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 OR4X1Q8NH49 305 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 ORAOV1Q8WV07 137 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 FGGYQ96C11 551 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 SNX22Q96L94 193 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 IMMP2LQ96T52 175 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 MIEN1Q9BRT3 115 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 PCGF1Q9BSM1 259 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 CBLN4Q9NTU7 201 aa10.03□□□□□ -0.8
TRAPPC3-205ENST00000462715 A6NIZ1 184 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 NDUFS8O00217 210 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 CEACAM4O75871 244 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 DDAH2O95865 285 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 HNF1AP20823 631 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 ACOT6Q3I5F7 207 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 EMC4Q5J8M3 183 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 SSX7Q7RTT5 188 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 CATSPERDQ86XM0 798 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 SGPP2Q8IWX5 399 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 TMEM104Q8NE00 496 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 DEFB126Q9BYW3 111 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 TRBV11-1A0A0K0K1C0 115 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 NKX6-3A6NJ46 265 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 SOX15O60248 233 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 TXNDC12O95881 172 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 CSN2P05814 226 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 GSTP1P09211 210 aaKnown RBP10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 POLR2HP52434 150 aaKnown RBP10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 SUPT4H1P63272 117 aaKnown RBP10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 PSG6Q00889 435 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 PRICKLE4Q2TBC4 344 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 TRMT12Q53H54 448 aaKnown RBP10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 NCR3LG1Q68D85 454 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 TEX38Q6PEX7 206 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 DGAT2L6Q6ZPD8 337 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 NUFIP2Q7Z417 695 aaKnown RBP10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 LHFPL1Q86WI0 220 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 OR51L1Q8NGJ5 315 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 ZNRF4Q8WWF5 429 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 EMG1Q92979 244 aaKnown RBP10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 LMF1Q96S06 567 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 DHDHQ9UQ10 334 aa10.02□□□□□ -0.81
TRAPPC3-205ENST00000462715 A0A1B0GU03 582 aa10.01□□□□□ -0.81
TRAPPC3-205ENST00000462715 ETV2O00321 342 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC3-205ENST00000462715 ZFAND5O76080 213 aa10.01□□□□□ -0.81
TRAPPC3-205ENST00000462715 SCAF4O95104 1147 aaKnown RBP10.01□□□□□ -0.81
TRAPPC3-205ENST00000462715 IFNA21P01568 189 aa10.01□□□□□ -0.81
TRAPPC3-205ENST00000462715 IGKV3-11P04433 115 aa10.01□□□□□ -0.81
TRAPPC3-205ENST00000462715 CELA2AP08217 269 aa10.01□□□□□ -0.81
TRAPPC3-205ENST00000462715 ALOX5APP20292 161 aa10.01□□□□□ -0.81
TRAPPC3-205ENST00000462715 APOBEC1P41238 236 aaKnown RBP10.01□□□□□ -0.81
TRAPPC3-205ENST00000462715 RPS4XP62701 263 aaKnown RBP10.01□□□□□ -0.81
TRAPPC3-205ENST00000462715 DUSP2Q05923 314 aa10.01□□□□□ -0.81
TRAPPC3-205ENST00000462715 FOXF1Q12946 379 aa10.01□□□□□ -0.81
TRAPPC3-205ENST00000462715 ANKRD55Q3KP44 614 aa10.01□□□□□ -0.81
TRAPPC3-205ENST00000462715 GLYATL3Q5SZD4 288 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms