RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 C7orf50Q9BRJ6 194 aaKnown RBP5.13□□□□□ -1.59
SMARCC1-204ENST00000462198 PCGF1Q9BSM1 259 aa5.13□□□□□ -1.59
SMARCC1-204ENST00000462198 NDUFAF3Q9BU61 184 aa5.13□□□□□ -1.59
SMARCC1-204ENST00000462198 IFT27Q9BW83 186 aa5.13□□□□□ -1.59
SMARCC1-204ENST00000462198 CACNG6Q9BXT2 260 aa5.13□□□□□ -1.59
SMARCC1-204ENST00000462198 LINC00470Q9BZP3 86 aa5.13□□□□□ -1.59
SMARCC1-204ENST00000462198 OR52D1Q9H346 318 aa5.13□□□□□ -1.59
SMARCC1-204ENST00000462198 TXNIPQ9H3M7 391 aa5.13□□□□□ -1.59
SMARCC1-204ENST00000462198 METTL17Q9H7H0 456 aaPredicted RBP5.13□□□□□ -1.59
SMARCC1-204ENST00000462198 SMCO4Q9NRQ5 59 aa5.13□□□□□ -1.59
SMARCC1-204ENST00000462198 SLC7A10Q9NS82 523 aa5.13□□□□□ -1.59
SMARCC1-204ENST00000462198 C19orf73Q9NVV2 129 aa5.13□□□□□ -1.59
SMARCC1-204ENST00000462198 CLN6Q9NWW5 311 aa5.13□□□□□ -1.59
SMARCC1-204ENST00000462198 TXNL4BQ9NX01 149 aaKnown RBP5.13□□□□□ -1.59
SMARCC1-204ENST00000462198 IL20RAQ9UHF4 553 aa5.13□□□□□ -1.59
SMARCC1-204ENST00000462198 ZNF346Q9UL40 294 aaKnown RBP5.13□□□□□ -1.59
SMARCC1-204ENST00000462198 A0A087WWL8 130 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 TRDV1A0A1B0GX56 115 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 NPIPB13A6NJU9 1138 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 VWC2LB2RUY7 222 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 NPIPB4C9JG80 1138 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 PRR23D1E9PI22 279 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 H3BN98 237 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 SIGLEC5O15389 551 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 UPK3AO75631 287 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 RAD51DO75771 328 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 LYZL6O75951 148 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 ZFPL1O95159 310 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 SOX14O95416 240 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 IGHV2-5P01817 119 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 IGHMP01871 453 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 MT-ND4LP03901 98 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 CD2P06729 351 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 UBBP0CG47 229 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 UBCP0CG48 685 aaKnown RBP5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 PRR23D2P0DMB1 279 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 SLC2A2P11168 524 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 GABRR1P24046 479 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 ZFP36P26651 326 aaKnown RBP5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 MPGP29372 298 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 SDC2P34741 201 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 MNDAP41218 407 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 IDH3GP51553 393 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 CDC42P60953 191 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 RPS27AP62979 156 aaKnown RBP5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 UBA52P62987 128 aaKnown RBP5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 TGFBR3Q03167 851 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 FABP9Q0Z7S8 132 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 FOXL1Q12952 345 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 RAB32Q13637 225 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 MED22Q15528 200 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 MPPED2Q15777 294 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 SNAPC1Q16533 368 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 KCNMB1Q16558 191 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 C10orf91Q5T1B1 145 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 WDR73Q6P4I2 378 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 NHLRC1Q6VVB1 395 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 ZNF620Q6ZNG0 422 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 BHLHA15Q7RTS1 189 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 NAA40Q86UY6 237 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 ANGPTL5Q86XS5 388 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 TMEM123Q8N131 208 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 PRSS35Q8N3Z0 413 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 ZNF383Q8NA42 475 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 NOXO1Q8NFA2 376 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 PXT1Q8NFP0 134 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 STEAP2Q8NFT2 490 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 OR2D3Q8NGH3 330 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 OR9Q1Q8NGQ5 310 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 OR5R1Q8NH85 324 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 TMEM54Q969K7 222 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 MRPL24Q96A35 216 aaKnown RBP5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 UPRTQ96BW1 309 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 MALSU1Q96EH3 234 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 Q96M85 177 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 TSPAN32Q96QS1 320 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 OR14A2Q96R54 314 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 GPX7Q96SL4 187 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 TSSK6Q9BXA6 273 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 ULBP2Q9BZM5 246 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 OR51J1Q9H342 316 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 EGLN3Q9H6Z9 239 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 GPR35Q9HC97 309 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 AMBNQ9NP70 447 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 FGF20Q9NP95 211 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 NRIP3Q9NQ35 241 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 SNTG1Q9NSN8 517 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 TAS2R16Q9NYV7 291 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 ZNF222Q9UK12 451 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 ADAM18Q9Y3Q7 739 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 RPL36Q9Y3U8 105 aaKnown RBP5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 IER3IP1Q9Y5U9 82 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 TENM3Q9P273 2699 aa5.12□□□□□ -1.59
SMARCC1-204ENST00000462198 IGHV4-61A0A0C4DH41 118 aa5.11□□□□□ -1.59
SMARCC1-204ENST00000462198 TMEM129A0AVI4 362 aa5.11□□□□□ -1.59
SMARCC1-204ENST00000462198 PRSS37A4D1T9 235 aa5.11□□□□□ -1.59
SMARCC1-204ENST00000462198 HMSDA8MTL9 139 aa5.11□□□□□ -1.59
SMARCC1-204ENST00000462198 ENTPD6O75354 484 aa5.11□□□□□ -1.59
SMARCC1-204ENST00000462198 KHDRBS3O75525 346 aaKnown RBP5.11□□□□□ -1.59
SMARCC1-204ENST00000462198 RGS11O94810 467 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms