RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 CA13Q8N1Q1 262 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 ZNF615Q8N8J6 731 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 SLC25A29Q8N8R3 303 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 APCDD1LQ8NCL9 501 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 OR5M1Q8NGP8 315 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 ZBED3Q96IU2 234 aaPredicted RBP2.2□□□□□ -2.06
CLK1-206ENST00000461326 Q96MT0 163 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 CDX2Q99626 313 aaPredicted RBP2.2□□□□□ -2.06
CLK1-206ENST00000461326 NAPGQ99747 312 aaPredicted RBP2.2□□□□□ -2.06
CLK1-206ENST00000461326 C1orf50Q9BV19 199 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 ZSCAN16Q9H4T2 348 aaPredicted RBP2.2□□□□□ -2.06
CLK1-206ENST00000461326 WFDC1Q9HC57 220 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 FBXO6Q9NRD1 293 aaPredicted RBP2.2□□□□□ -2.06
CLK1-206ENST00000461326 VAPAQ9P0L0 249 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 AP3M1Q9Y2T2 418 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 V9GYY9 64 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 ANKRD12Q6UB98 2062 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 MYH8P13535 1937 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 LAMB1P07942 1786 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 DOCK1Q14185 1865 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 ZNF532Q9HCE3 1301 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 SIPA1L1O43166 1804 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 BAZ2AQ9UIF9 1905 aaKnown RBP2.19□□□□□ -2.06
CLK1-206ENST00000461326 TRAV8-6A0A0B4J262 113 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 COLCA2A8K830 154 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 PSMD11O00231 422 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 TCAPO15273 167 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 MAS1P04201 325 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 HTR2CP28335 458 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 DEKP35659 375 aaKnown RBP2.19□□□□□ -2.06
CLK1-206ENST00000461326 PPP1CAP62136 330 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 ZNF616Q08AN1 781 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 ADIGQ0VDE8 80 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 BTN1A1Q13410 526 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 TMED1Q13445 227 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 MOBPQ13875 183 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 IDNKQ5T6J7 187 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 HHATQ5VTY9 493 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 NT5DC3Q86UY8 548 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 ZNF101Q8IZC7 436 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 SYS1Q8N2H4 156 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 ZNF645Q8N7E2 425 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 ST20-AS1Q8NBB2 130 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 OR2Z1Q8NG97 314 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 OR6K2Q8NGY2 324 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 NT5CQ8TCD5 201 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 DOK4Q8TEW6 326 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 TMEM159Q96B96 161 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 TBL1XR1Q9BZK7 514 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 SYT4Q9H2B2 425 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 ANKHQ9HCJ1 492 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 CSNK1G1Q9HCP0 422 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 RAB23Q9ULC3 237 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 DDX60LQ5H9U9 1706 aaKnown RBP2.19□□□□□ -2.06
CLK1-206ENST00000461326 PHIPQ8WWQ0 1821 aa2.19□□□□□ -2.06
CLK1-206ENST00000461326 CENPFP49454 3210 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 CCL15-CCL14A0A0B4J2E2 113 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 ISPDA4D126 451 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 A8MWL6 223 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 M0R1B8 84 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 RNF113AO15541 343 aaKnown RBP2.18□□□□□ -2.06
CLK1-206ENST00000461326 CCDC22O60826 627 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 APOA1P02647 267 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 RPN2P04844 631 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 SNRPAP09012 282 aaKnown RBP2.18□□□□□ -2.06
CLK1-206ENST00000461326 ZNF286BP0CG31 522 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 NELFEP18615 380 aaKnown RBP2.18□□□□□ -2.06
CLK1-206ENST00000461326 GPR4P46093 362 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 TAS2R43P59537 309 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 SHHQ15465 462 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 TAL2Q16559 108 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 CCL15Q16663 113 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 FBXO48Q5FWF7 155 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 DNLZQ5SXM8 178 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 FAM27D1Q5T7N8 215 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 SYT6Q5T7P8 510 aaPredicted RBP2.18□□□□□ -2.06
CLK1-206ENST00000461326 ORMDL3Q8N138 153 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 PDCL2Q8N4E4 241 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 RNF182Q8N6D2 247 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 SLC35G3Q8N808 338 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 ZNF709Q8N972 641 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 CYB561A3Q8NBI2 242 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 OR8K3Q8NH51 312 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 LRRC20Q8TCA0 184 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 S100PBPQ96BU1 408 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 OPTNQ96CV9 577 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 SIKE1Q9BRV8 207 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 CHID1Q9BWS9 393 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 RSPO3Q9BXY4 272 aaPredicted RBP2.18□□□□□ -2.06
CLK1-206ENST00000461326 FRMD8P1Q9BZ68 369 aaPredicted RBP2.18□□□□□ -2.06
CLK1-206ENST00000461326 ULBP2Q9BZM5 246 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 PRORYQ9H606 182 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 STK38LQ9Y2H1 464 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 ZNF835Q9Y2P0 537 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 ACOT9Q9Y305 439 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 RFX7Q2KHR2 1363 aa2.18□□□□□ -2.06
CLK1-206ENST00000461326 TNRC18O15417 2968 aaPredicted RBP2.18□□□□□ -2.06
CLK1-206ENST00000461326 HTTP42858 3142 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 ZSWIM8A7E2V4 1837 aa2.17□□□□□ -2.06
CLK1-206ENST00000461326 DNAH12Q6ZR08 3092 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms