RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 UTS2BQ765I0 119 aa11.55□□□□□ -0.56
DNMT3A-207ENST00000461228 OR2W3Q7Z3T1 314 aa11.55□□□□□ -0.56
DNMT3A-207ENST00000461228 TMEM179BQ7Z7N9 219 aa11.55□□□□□ -0.56
DNMT3A-207ENST00000461228 CATSPERDQ86XM0 798 aa11.55□□□□□ -0.56
DNMT3A-207ENST00000461228 ANGPTL5Q86XS5 388 aa11.55□□□□□ -0.56
DNMT3A-207ENST00000461228 SLC35F2Q8IXU6 374 aa11.55□□□□□ -0.56
DNMT3A-207ENST00000461228 CHST4Q8NCG5 386 aa11.55□□□□□ -0.56
DNMT3A-207ENST00000461228 OR52N4Q8NGI2 321 aa11.55□□□□□ -0.56
DNMT3A-207ENST00000461228 SLAMF9Q96A28 289 aa11.55□□□□□ -0.56
DNMT3A-207ENST00000461228 COMMD4Q9H0A8 199 aa11.55□□□□□ -0.56
DNMT3A-207ENST00000461228 PAPOLBQ9NRJ5 636 aaKnown RBP11.55□□□□□ -0.56
DNMT3A-207ENST00000461228 MRM2Q9UI43 246 aaKnown RBP11.55□□□□□ -0.56
DNMT3A-207ENST00000461228 BIRC6Q9NR09 4857 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 ZNF670-ZNF695F2Z2N8 137 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 C3orf84H3BNL1 204 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 BUB1B-PAK6H3BSN5 160 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 SYT7O43581 403 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 CYB5AP00167 134 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 SERPINA3P01011 423 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 VSIG8P0DPA2 414 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 CALB2P22676 271 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 GABRR1P24046 479 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 PTGFRP43088 359 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 HCCSP53701 268 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 EFNB1P98172 346 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 KLHL22Q53GT1 634 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 KHDC1LQ5JSQ8 128 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 AADACL4Q5VUY2 407 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 MEPCEQ7L2J0 689 aaKnown RBP11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 FAM58AQ8N1B3 248 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 TRMT10AQ8TBZ6 339 aaKnown RBP11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 FAM107BQ9H098 131 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 NCOR1P1Q9H4R4 102 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 FAM53CQ9NYF3 392 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 GTF2A1LQ9UNN4 478 aa11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 AMMECR1Q9Y4X0 333 aaPredicted RBP11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 EPPK1P58107 5090 aaKnown RBP11.54□□□□□ -0.56
DNMT3A-207ENST00000461228 FAM230AA0A1W2PPH8 454 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 ZNF729A6NN14 1252 aaPredicted RBP11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 GNGT2O14610 69 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 KRT8P05787 483 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 FAM106CPP0CH98 169 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 CDK2P24941 298 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 HOXD3P31249 432 aaPredicted RBP11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 CRISP1P54107 249 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 ISL1P61371 349 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 DGCR2P98153 550 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 DEFB121Q5J5C9 76 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 UNQ9370/PRO34162Q6UXP9 181 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 LHFPL2Q6ZUX7 228 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 TRAPPC6BQ86SZ2 158 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 EGFL6Q8IUX8 553 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 LINC00574Q9H8X3 128 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 KRT84Q9NSB2 600 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 TVP23BQ9NYZ1 205 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 ENOPH1Q9UHY7 261 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 ZNF580Q9UK33 172 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 U3KQK5 164 aa11.53□□□□□ -0.56
DNMT3A-207ENST00000461228 LOC107986453A0A1B0GWG9 222 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 B2RBV5 119 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 PRKYO43930 277 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 MMP23AO75900 390 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 MT-ND2P03891 347 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 PRKACBP22694 351 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 OR3A4PP47883 348 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 KPNB1Q14974 876 aaKnown RBP11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 PRAMEF5Q5TYX0 476 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 RNF144BQ7Z419 303 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 SAXO1Q8IYX7 474 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 OR8H3Q8N146 312 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 TPRX1Q8N7U7 411 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 C5orf56Q8N8D9 126 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 RNF152Q8N8N0 203 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 OR9G1Q8NH87 305 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 TMEM163Q8TC26 289 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 CANT1Q8WVQ1 401 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 STMN2Q93045 179 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 CCDC124Q96CT7 223 aaKnown RBP11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 APOL4Q9BPW4 351 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 CHST6Q9GZX3 395 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 ZNF286AQ9HBT8 521 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 HMG20AQ9NP66 347 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 EXOSC4Q9NPD3 245 aaKnown RBP11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 RBFOX1Q9NWB1 397 aaKnown RBP11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 OR6C3Q9NZP0 311 aa11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 LSM4Q9Y4Z0 139 aaKnown RBP11.52□□□□□ -0.57
DNMT3A-207ENST00000461228 ODAMA1E959 279 aa11.51□□□□□ -0.57
DNMT3A-207ENST00000461228 KDM4BO94953 1096 aa11.51□□□□□ -0.57
DNMT3A-207ENST00000461228 IGHG2P01859 326 aa11.51□□□□□ -0.57
DNMT3A-207ENST00000461228 OR2T7P0C7T2 308 aa11.51□□□□□ -0.57
DNMT3A-207ENST00000461228 ATP1B3P54709 279 aa11.51□□□□□ -0.57
DNMT3A-207ENST00000461228 PRRX1P54821 245 aa11.51□□□□□ -0.57
DNMT3A-207ENST00000461228 SLC35B1P78383 322 aa11.51□□□□□ -0.57
DNMT3A-207ENST00000461228 TMED1Q13445 227 aa11.51□□□□□ -0.57
DNMT3A-207ENST00000461228 PTGES3Q15185 160 aaKnown RBP11.51□□□□□ -0.57
DNMT3A-207ENST00000461228 TMEM236Q5W0B7 351 aa11.51□□□□□ -0.57
DNMT3A-207ENST00000461228 C12orf73Q69YU5 71 aa11.51□□□□□ -0.57
DNMT3A-207ENST00000461228 C10orf99Q6UWK7 81 aa11.51□□□□□ -0.57
DNMT3A-207ENST00000461228 BATF2Q8N1L9 274 aa11.51□□□□□ -0.57
DNMT3A-207ENST00000461228 OR4D6Q8NGJ1 314 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms