RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 SLC25A38Q96DW6 304 aa2.53□□□□□ -2
VPS8-215ENST00000460158 DCUN1D1Q96GG9 259 aa2.53□□□□□ -2
VPS8-215ENST00000460158 PGLYRP4Q96LB8 373 aa2.53□□□□□ -2
VPS8-215ENST00000460158 C9orf85Q96MD7 179 aa2.53□□□□□ -2
VPS8-215ENST00000460158 OR2M4Q96R27 311 aa2.53□□□□□ -2
VPS8-215ENST00000460158 TBX5Q99593 518 aa2.53□□□□□ -2
VPS8-215ENST00000460158 MCHR1Q99705 422 aa2.53□□□□□ -2
VPS8-215ENST00000460158 FAAP24Q9BTP7 215 aa2.53□□□□□ -2
VPS8-215ENST00000460158 SUCNR1Q9BXA5 334 aa2.53□□□□□ -2
VPS8-215ENST00000460158 SPNS1Q9H2V7 528 aa2.53□□□□□ -2
VPS8-215ENST00000460158 RBM22Q9NW64 420 aaKnown RBP eCLIP2.53□□□□□ -2
VPS8-215ENST00000460158 DDIT4Q9NX09 232 aa2.53□□□□□ -2
VPS8-215ENST00000460158 SLC35A3Q9Y2D2 325 aa2.53□□□□□ -2
VPS8-215ENST00000460158 POLR1DQ9Y2S0 133 aa2.53□□□□□ -2
VPS8-215ENST00000460158 MYH7P12883 1935 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 POGZQ7Z3K3 1410 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 DOCK5Q9H7D0 1870 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 RTL9Q8NET4 1388 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 IGHV3OR16-12A0A075B7B8 117 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 A0A0G2JLM5 398 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 A0A0U1RQV1 116 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 RBMY1BA6NDE4 496 aaKnown RBP2.52□□□□□ -2.01
VPS8-215ENST00000460158 RBMY1EA6NEQ0 496 aaKnown RBP2.52□□□□□ -2.01
VPS8-215ENST00000460158 DHRS7CA6NNS2 312 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 EVPLLA8MZ36 301 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 LINC00587B1AMM8 73 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 C15orf65H3BRN8 121 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 H7C1H1 209 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 SLC17A3O00476 420 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 SCRG1O75711 98 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 SULT1C4O75897 302 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 RBMY1DP0C7P1 496 aaKnown RBP2.52□□□□□ -2.01
VPS8-215ENST00000460158 RBMY1A1P0DJD3 496 aaKnown RBP2.52□□□□□ -2.01
VPS8-215ENST00000460158 PGA4P0DJD7 388 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 PGA3P0DJD8 388 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 SULT1A3P0DMM9 295 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 SULT1A4P0DMN0 295 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 FOLR1P15328 257 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 S100PP25815 95 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 CD34P28906 385 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 ADORA2BP29275 332 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 PPICP45877 212 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 RPL29P47914 159 aaKnown RBP2.52□□□□□ -2.01
VPS8-215ENST00000460158 RPL34P49207 117 aaKnown RBP2.52□□□□□ -2.01
VPS8-215ENST00000460158 APOC4P55056 127 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 TAS2R43P59537 309 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 HIST1H3AP68431 136 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 H3F3AP84243 136 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 DEFA6Q01524 100 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 RUNX3Q13761 415 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 PMVKQ15126 192 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 IRF4Q15306 451 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 Q1RN00 199 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 TIMM50Q3ZCQ8 353 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 TRMT12Q53H54 448 aaKnown RBP2.52□□□□□ -2.01
VPS8-215ENST00000460158 SAMD13Q5VXD3 122 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 TMEM215Q68D42 235 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 UGT2A3Q6UWM9 527 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 SPNS3Q6ZMD2 512 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 FAM183BPQ6ZVS7 135 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 HIST2H3AQ71DI3 136 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 GRINAQ7Z429 371 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 OAFQ86UD1 273 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 GAPTQ8N292 157 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 ZNF676Q8N7Q3 588 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 CHST4Q8NCG5 386 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 NEIL3Q8TAT5 605 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 PIFOQ8TCI5 191 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 LRRC58Q96CX6 371 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 SMARCD1Q96GM5 515 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 GPER1Q99527 375 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 SULT4A1Q9BR01 284 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 GINS3Q9BRX5 216 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 SLC25A39Q9BZJ4 359 aaPredicted RBP2.52□□□□□ -2.01
VPS8-215ENST00000460158 DCSTAMPQ9H295 470 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 RPF2Q9H7B2 306 aaKnown RBP2.52□□□□□ -2.01
VPS8-215ENST00000460158 DMAC2Q9NW81 257 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 CALYQ9NYX4 217 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 ZNF256Q9Y2P7 627 aaPredicted RBP2.52□□□□□ -2.01
VPS8-215ENST00000460158 V9GY05 133 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 ITGB4P16144 1822 aa2.52□□□□□ -2.01
VPS8-215ENST00000460158 CNTLNQ9NXG0 1405 aa2.51□□□□□ -2.01
VPS8-215ENST00000460158 DOCK3Q8IZD9 2030 aa2.51□□□□□ -2.01
VPS8-215ENST00000460158 NRCAMQ92823 1304 aa2.51□□□□□ -2.01
VPS8-215ENST00000460158 WDR97A6NE52 1622 aa2.51□□□□□ -2.01
VPS8-215ENST00000460158 IGKV1D-8A0A087WSZ0 117 aa2.51□□□□□ -2.01
VPS8-215ENST00000460158 A0A087WUJ7 227 aa2.51□□□□□ -2.01
VPS8-215ENST00000460158 IGHV1OR21-1A0A087WYE8 117 aa2.51□□□□□ -2.01
VPS8-215ENST00000460158 A0A0B4J2A0 478 aa2.51□□□□□ -2.01
VPS8-215ENST00000460158 A0A1B0GV90 55 aa2.51□□□□□ -2.01
VPS8-215ENST00000460158 FAM159BA6NKW6 160 aa2.51□□□□□ -2.01
VPS8-215ENST00000460158 ZNF726A6NNF4 738 aa2.51□□□□□ -2.01
VPS8-215ENST00000460158 ZNF705EA8MWA4 302 aaPredicted RBP2.51□□□□□ -2.01
VPS8-215ENST00000460158 I3L4J1 428 aa2.51□□□□□ -2.01
VPS8-215ENST00000460158 RDH16O75452 317 aa2.51□□□□□ -2.01
VPS8-215ENST00000460158 REM1O75628 298 aa2.51□□□□□ -2.01
VPS8-215ENST00000460158 MOSP00540 346 aa2.51□□□□□ -2.01
VPS8-215ENST00000460158 IGKV5-2P06315 115 aa2.51□□□□□ -2.01
VPS8-215ENST00000460158 EIF4EP06730 217 aaKnown RBP2.51□□□□□ -2.01
VPS8-215ENST00000460158 IL3P08700 152 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms