RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 CHD9Q3L8U1 2897 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 A0A087WX48 190 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 A0A0G2JN53 185 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 ATP6AP2A0A1C7CYW4 349 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 TCRBV7S3A2A0A539 114 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 OR4C46A6NHA9 309 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 LINC01548A6NM66 108 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 RBFOX2O43251 390 aaKnown RBP eCLIP4.59□□□□□ -1.67
VPS41-209ENST00000457055 PIAS1O75925 651 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 TRIOO75962 3097 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 CA1P00915 261 aaPredicted RBP4.59□□□□□ -1.67
VPS41-209ENST00000457055 IGHV2-5P01817 119 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 CD2P06729 351 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 SMIM17P0DL12 118 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 ADORA3P0DMS8 318 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 CYP2D6P10635 497 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 TDGF1P13385 188 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 CYBAP13498 195 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 AZU1P20160 251 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 CRHBPP24387 322 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 PPIFP30405 207 aaKnown RBP4.59□□□□□ -1.67
VPS41-209ENST00000457055 GABRA2P47869 451 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 GLIPR1P48060 266 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 RFX2P48378 723 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 PDX1P52945 283 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 XGP55808 180 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 ZNF121P58317 390 aaPredicted RBP4.59□□□□□ -1.67
VPS41-209ENST00000457055 RUNX1Q01196 453 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 PLCXD2Q0VAA5 305 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 SLC10A2Q12908 348 aaPredicted RBP4.59□□□□□ -1.67
VPS41-209ENST00000457055 ZNF154Q13106 437 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 FAM53BQ14153 422 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 RBMS2Q15434 407 aaKnown RBP4.59□□□□□ -1.67
VPS41-209ENST00000457055 OR8B8Q15620 311 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 C4orf26Q17RF5 130 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 LY6KQ17RY6 165 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 TMEM241Q24JQ0 296 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 ZNF181Q2M3W8 571 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 C2orf68Q2NKX9 166 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 SLC25A52Q3SY17 297 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 SYT14P1Q58G82 188 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 ZNF542PQ5EBM4 170 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 PYY3Q5JQD4 70 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 DCST2Q5T1A1 773 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 C1orf195Q5TG92 126 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 TMEM215Q68D42 235 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 IZUMO2Q6UXV1 221 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 C12orf54Q6X4T0 127 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 ADAMTSL5Q6ZMM2 481 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 FAM19A1Q7Z5A9 133 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 ARPINQ7Z6K5 226 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 OAFQ86UD1 273 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 FBXO16Q8IX29 292 aaPredicted RBP4.59□□□□□ -1.67
VPS41-209ENST00000457055 CFAP52Q8N1V2 620 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 TMEM99Q8N816 258 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 ZNF614Q8N883 585 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 ARL14EPQ8N8R7 260 aaPredicted RBP4.59□□□□□ -1.67
VPS41-209ENST00000457055 BMPERQ8N8U9 685 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 WDR31Q8NA23 367 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 THAP8Q8NA92 274 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 GATD1Q8NB37 220 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 DUSP18Q8NEJ0 188 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 ZNF548Q8NEK5 533 aaPredicted RBP4.59□□□□□ -1.67
VPS41-209ENST00000457055 BEST4Q8NFU0 473 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 OR4C13Q8NGP0 309 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 OR1L8Q8NGR8 309 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 ZNRF2Q8NHG8 242 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 PTX4Q96A99 478 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 APOBEC3DQ96AK3 386 aaPredicted RBP4.59□□□□□ -1.67
VPS41-209ENST00000457055 DNAJC19Q96DA6 116 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 SCMH1Q96GD3 660 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 DIRAS2Q96HU8 199 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 ST6GAL2Q96JF0 529 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 IL17FQ96PD4 163 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 OR2M4Q96R27 311 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 MS4A6AQ9H2W1 248 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 IKZF5Q9H5V7 419 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 TAF9BQ9HBM6 251 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 GDF3Q9NR23 364 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 UBQLN4Q9NRR5 601 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 RBFOX1Q9NWB1 397 aaKnown RBP4.59□□□□□ -1.67
VPS41-209ENST00000457055 DLL3Q9NYJ7 618 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 SIGLEC8Q9NYZ4 499 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 LSM7Q9UK45 103 aaKnown RBP4.59□□□□□ -1.67
VPS41-209ENST00000457055 PILRAQ9UKJ1 303 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 POMT2Q9UKY4 750 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 ST3GAL6Q9Y274 331 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 WDR83OSQ9Y284 106 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 KLHDC2Q9Y2U9 406 aa4.59□□□□□ -1.67
VPS41-209ENST00000457055 EXOSC1Q9Y3B2 195 aaKnown RBP4.59□□□□□ -1.67
VPS41-209ENST00000457055 PTPRFP10586 1907 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 CHD7Q9P2D1 2997 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 SMIM28A0A1B0GU29 152 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 MED19A0JLT2 244 aaPredicted RBP4.58□□□□□ -1.68
VPS41-209ENST00000457055 WDR27A2RRH5 827 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 TMEM202A6NGA9 273 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 VWC2LB2RUY7 222 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 TCP10L2B9ZVM9 353 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 TRIM49D1C9J1S8 452 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 FAM157AC9JC47 383 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms