RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 RAB6AP20340 208 aa11.79□□□□□ -0.52
LINC00887-204ENST00000456816 PITPNBP48739 271 aa11.79□□□□□ -0.52
LINC00887-204ENST00000456816 EFNB2P52799 333 aa11.79□□□□□ -0.52
LINC00887-204ENST00000456816 PLA2G7Q13093 441 aa11.79□□□□□ -0.52
LINC00887-204ENST00000456816 MPV17LQ2QL34 196 aa11.79□□□□□ -0.52
LINC00887-204ENST00000456816 ESCO2Q56NI9 601 aa11.79□□□□□ -0.52
LINC00887-204ENST00000456816 PAN3Q58A45 887 aaKnown RBP11.79□□□□□ -0.52
LINC00887-204ENST00000456816 ZNF788Q6ZQV5 615 aa11.79□□□□□ -0.52
LINC00887-204ENST00000456816 CHST4Q8NCG5 386 aa11.79□□□□□ -0.52
LINC00887-204ENST00000456816 OR56B1Q8NGI3 324 aa11.79□□□□□ -0.52
LINC00887-204ENST00000456816 OR5H6Q8NGV6 325 aa11.79□□□□□ -0.52
LINC00887-204ENST00000456816 PPP1R35Q8TAP8 253 aa11.79□□□□□ -0.52
LINC00887-204ENST00000456816 ST8SIA4Q92187 359 aa11.79□□□□□ -0.52
LINC00887-204ENST00000456816 NICN1Q9BSH3 213 aa11.79□□□□□ -0.52
LINC00887-204ENST00000456816 C6orf62Q9GZU0 229 aaPredicted RBP11.79□□□□□ -0.52
LINC00887-204ENST00000456816 PATZ1Q9HBE1 687 aaKnown RBP11.79□□□□□ -0.52
LINC00887-204ENST00000456816 RHBDL2Q9NX52 303 aa11.79□□□□□ -0.52
LINC00887-204ENST00000456816 ZNF222Q9UK12 451 aa11.79□□□□□ -0.52
LINC00887-204ENST00000456816 SPATA2Q9UM82 520 aa11.79□□□□□ -0.52
LINC00887-204ENST00000456816 NOTCH2Q04721 2471 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 A0A1B0GW55 424 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 FAM90A10PA6NDY2 464 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 FAM90A18PA6NE21 464 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 FAM90A16PA6NEW6 464 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 FAM90A20PA6NIJ5 464 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 FAM90A8PA6NJQ4 464 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 FAM90A7PA6NKC0 464 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 FAM90A22PA8MWA6 464 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 FAM90A12PA8MX19 464 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 FAM90A5PA8MXJ8 464 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 FAM90A23PA8MXZ1 464 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 FAM25AB3EWG3 89 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 FAM25CB3EWG5 89 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 FAM25GB3EWG6 89 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 LDLRAD4O15165 306 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 RGS5O15539 181 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 IGHV2-5P01817 119 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 FAM90A15PP0C7V4 464 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 FAM90A13PP0C7W8 464 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 FAM90A14PP0C7W9 464 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 FAM90A24PP0C7X0 464 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 DUX4L2P0CJ85 424 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 DUX4L3P0CJ86 424 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 DUX4L4P0CJ87 422 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 DUX4L5P0CJ88 424 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 DUX4L6P0CJ89 424 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 DUX4L7P0CJ90 424 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 SELLP14151 372 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 BLVRBP30043 206 aaPredicted RBP11.78□□□□□ -0.52
LINC00887-204ENST00000456816 VEGFCP49767 419 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 GNB2P62879 340 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 UBE2NLQ5JXB2 153 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 ATPAF1Q5TC12 328 aaPredicted RBP11.78□□□□□ -0.52
LINC00887-204ENST00000456816 DUX4L9Q6RFH8 374 aaPredicted RBP11.78□□□□□ -0.52
LINC00887-204ENST00000456816 ZNRF1Q8ND25 227 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 MCFD2Q8NI22 146 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 H1FXQ92522 213 aaKnown RBP11.78□□□□□ -0.52
LINC00887-204ENST00000456816 PTX4Q96A99 478 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 SDSLQ96GA7 329 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 CHST6Q9GZX3 395 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 LPAR5Q9H1C0 372 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 PPA2Q9H2U2 334 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 SPACA1Q9HBV2 294 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 ING3Q9NXR8 418 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 KAAG1Q9UBP8 84 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 DUX4Q9UBX2 424 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 SLC25A10Q9UBX3 287 aaPredicted RBP11.78□□□□□ -0.52
LINC00887-204ENST00000456816 CLN8Q9UBY8 286 aa11.78□□□□□ -0.52
LINC00887-204ENST00000456816 MCRIP1C9JLW8 97 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 H7C1Q1 480 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 SLC33A1O00400 549 aaPredicted RBP11.77□□□□□ -0.53
LINC00887-204ENST00000456816 DVL1O14640 695 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 SMAD7O15105 426 aaKnown RBP11.77□□□□□ -0.53
LINC00887-204ENST00000456816 PDCD6O75340 191 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 WNT2P09544 360 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 FUT3P21217 361 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 DYNC1I2Q13409 638 aaKnown RBP11.77□□□□□ -0.53
LINC00887-204ENST00000456816 EDDM3AQ14507 147 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 GRK1Q15835 563 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 RAB12Q6IQ22 244 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 Q6P435 159 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 GDPD3Q7L5L3 318 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 SUMF2Q8NBJ7 301 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 MAPK1IP1LQ8NDC0 245 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 SNX22Q96L94 193 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 DPCDQ9BVM2 203 aaPredicted RBP11.77□□□□□ -0.53
LINC00887-204ENST00000456816 SSBP3Q9BWW4 388 aaPredicted RBP11.77□□□□□ -0.53
LINC00887-204ENST00000456816 TM2D1Q9BX74 207 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 OCEL1Q9H607 264 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 ZNF581Q9P0T4 197 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 CTSZQ9UBR2 303 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 ADAM30Q9UKF2 790 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 PEX16Q9Y5Y5 336 aa11.77□□□□□ -0.53
LINC00887-204ENST00000456816 PDZD2O15018 2839 aa11.76□□□□□ -0.53
LINC00887-204ENST00000456816 A0A075B6Q4 140 aa11.76□□□□□ -0.53
LINC00887-204ENST00000456816 TNFRSF13BO14836 293 aaPredicted RBP11.76□□□□□ -0.53
LINC00887-204ENST00000456816 HPGDSO60760 199 aa11.76□□□□□ -0.53
LINC00887-204ENST00000456816 SCGNO76038 276 aa11.76□□□□□ -0.53
LINC00887-204ENST00000456816 AMY2BP19961 511 aa11.76□□□□□ -0.53
LINC00887-204ENST00000456816 IL2RGP31785 369 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms