RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 KDM4BO94953 1096 aa12.81□□□□□ -0.36
GPC1-206ENST00000455111 UBCP0CG48 685 aaKnown RBP12.81□□□□□ -0.36
GPC1-206ENST00000455111 GABRB1P18505 474 aa12.81□□□□□ -0.36
GPC1-206ENST00000455111 LMO1P25800 156 aa12.81□□□□□ -0.36
GPC1-206ENST00000455111 PEX2P28328 305 aa12.81□□□□□ -0.36
GPC1-206ENST00000455111 ERP29P30040 261 aaKnown RBP12.81□□□□□ -0.36
GPC1-206ENST00000455111 ATP1B3P54709 279 aa12.81□□□□□ -0.36
GPC1-206ENST00000455111 MTCP1P56278 107 aa12.81□□□□□ -0.36
GPC1-206ENST00000455111 TMED1Q13445 227 aa12.81□□□□□ -0.36
GPC1-206ENST00000455111 CDK5R1Q15078 307 aa12.81□□□□□ -0.36
GPC1-206ENST00000455111 C17orf58Q2M2W7 97 aa12.81□□□□□ -0.36
GPC1-206ENST00000455111 CCDC54Q8NEL0 328 aa12.81□□□□□ -0.36
GPC1-206ENST00000455111 OR5D18Q8NGL1 313 aa12.81□□□□□ -0.36
GPC1-206ENST00000455111 CORO2AQ92828 525 aa12.81□□□□□ -0.36
GPC1-206ENST00000455111 C10orf35Q96D05 121 aa12.81□□□□□ -0.36
GPC1-206ENST00000455111 COMMD4Q9H0A8 199 aa12.81□□□□□ -0.36
GPC1-206ENST00000455111 ABCB10Q9NRK6 738 aa12.81□□□□□ -0.36
GPC1-206ENST00000455111 HHLA2Q9UM44 414 aa12.81□□□□□ -0.36
GPC1-206ENST00000455111 LY6LH3BQJ8 138 aa12.8□□□□□ -0.36
GPC1-206ENST00000455111 ALPLP05186 524 aa12.8□□□□□ -0.36
GPC1-206ENST00000455111 CGB3P0DN86 165 aa12.8□□□□□ -0.36
GPC1-206ENST00000455111 CGB7P0DN87 165 aa12.8□□□□□ -0.36
GPC1-206ENST00000455111 ZP1P60852 638 aa12.8□□□□□ -0.36
GPC1-206ENST00000455111 AESQ08117 197 aa12.8□□□□□ -0.36
GPC1-206ENST00000455111 C1orf146Q5VVC0 180 aa12.8□□□□□ -0.36
GPC1-206ENST00000455111 NDNFQ8TB73 568 aa12.8□□□□□ -0.36
GPC1-206ENST00000455111 RNFT2Q96EX2 444 aa12.8□□□□□ -0.36
GPC1-206ENST00000455111 CENPNQ96H22 339 aaPredicted RBP12.8□□□□□ -0.36
GPC1-206ENST00000455111 OPALINQ96PE5 141 aa12.8□□□□□ -0.36
GPC1-206ENST00000455111 PPIL3Q9H2H8 161 aaKnown RBP12.8□□□□□ -0.36
GPC1-206ENST00000455111 ISG20L2Q9H9L3 353 aaKnown RBP12.8□□□□□ -0.36
GPC1-206ENST00000455111 GSTK1Q9Y2Q3 226 aa12.8□□□□□ -0.36
GPC1-206ENST00000455111 UBE2J1Q9Y385 318 aaPredicted RBP12.8□□□□□ -0.36
GPC1-206ENST00000455111 COL7A1Q02388 2944 aa12.8□□□□□ -0.36
GPC1-206ENST00000455111 A0A1W2PRX2 142 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 E9PI62 339 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 F2RL2O00254 374 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 SLC16A6O15403 523 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 IGLL1P15814 213 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 CDK2P24941 298 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 VDAC2P45880 294 aaPredicted RBP12.79□□□□□ -0.36
GPC1-206ENST00000455111 BDH1Q02338 343 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 SPIN3Q5JUX0 258 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 SLC25A30Q5SVS4 291 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 TMEM244Q5VVB8 128 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 FOXB2Q5VYV0 432 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 HEPN1Q6WQI6 88 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 Q8IYB0 196 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 ABHD12Q8N2K0 398 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 WFDC9Q8NEX5 89 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 OR13C9Q8NGT0 318 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 PYDC1Q8WXC3 89 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 HRASLS5Q96KN8 279 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 ADI1Q9BV57 179 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 ZNF581Q9P0T4 197 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 PITPNC1Q9UKF7 332 aa12.79□□□□□ -0.36
GPC1-206ENST00000455111 EXOGQ9Y2C4 368 aaKnown RBP12.79□□□□□ -0.36
GPC1-206ENST00000455111 RYR3Q15413 4870 aa12.78□□□□□ -0.36
GPC1-206ENST00000455111 SLC33A1O00400 549 aaPredicted RBP12.78□□□□□ -0.36
GPC1-206ENST00000455111 DYNC1I1O14576 645 aa12.78□□□□□ -0.36
GPC1-206ENST00000455111 EI24O14681 340 aa12.78□□□□□ -0.36
GPC1-206ENST00000455111 MT-ND2P03891 347 aa12.78□□□□□ -0.36
GPC1-206ENST00000455111 HTR1DP28221 377 aa12.78□□□□□ -0.36
GPC1-206ENST00000455111 CD34P28906 385 aa12.78□□□□□ -0.36
GPC1-206ENST00000455111 CCR9P51686 369 aa12.78□□□□□ -0.36
GPC1-206ENST00000455111 EMX1Q04741 257 aaPredicted RBP12.78□□□□□ -0.36
GPC1-206ENST00000455111 IL18R1Q13478 541 aa12.78□□□□□ -0.36
GPC1-206ENST00000455111 ZIK1Q3SY52 487 aaPredicted RBP12.78□□□□□ -0.36
GPC1-206ENST00000455111 LHFPL2Q6ZUX7 228 aa12.78□□□□□ -0.36
GPC1-206ENST00000455111 ENTHD1Q8IYW4 607 aa12.78□□□□□ -0.36
GPC1-206ENST00000455111 OR5AU1Q8NGC0 362 aa12.78□□□□□ -0.36
GPC1-206ENST00000455111 LGALS12Q96DT0 336 aa12.78□□□□□ -0.36
GPC1-206ENST00000455111 C4orf36Q96KX1 117 aa12.78□□□□□ -0.36
GPC1-206ENST00000455111 EXOSC4Q9NPD3 245 aaKnown RBP12.78□□□□□ -0.36
GPC1-206ENST00000455111 ENOPH1Q9UHY7 261 aa12.78□□□□□ -0.36
GPC1-206ENST00000455111 MYRFQ9Y2G1 1151 aa12.78□□□□□ -0.36
GPC1-206ENST00000455111 A0A087X0M5 115 aa12.77□□□□□ -0.37
GPC1-206ENST00000455111 A0A1B0GX30 115 aa12.77□□□□□ -0.37
GPC1-206ENST00000455111 PIN1P1O15428 100 aa12.77□□□□□ -0.37
GPC1-206ENST00000455111 SERPINA3P01011 423 aa12.77□□□□□ -0.37
GPC1-206ENST00000455111 FCGR1AP12314 374 aa12.77□□□□□ -0.37
GPC1-206ENST00000455111 ATP6V1E1P36543 226 aa12.77□□□□□ -0.37
GPC1-206ENST00000455111 SNRPGP62308 76 aaKnown RBP12.77□□□□□ -0.37
GPC1-206ENST00000455111 DIAPH2-AS1Q14236 149 aa12.77□□□□□ -0.37
GPC1-206ENST00000455111 HLA-DRB5Q30154 266 aa12.77□□□□□ -0.37
GPC1-206ENST00000455111 FAM220AQ7Z4H9 259 aa12.77□□□□□ -0.37
GPC1-206ENST00000455111 MRAPQ8TCY5 172 aa12.77□□□□□ -0.37
GPC1-206ENST00000455111 RGP1Q92546 391 aaPredicted RBP12.77□□□□□ -0.37
GPC1-206ENST00000455111 SPSB1Q96BD6 273 aa12.77□□□□□ -0.37
GPC1-206ENST00000455111 NECAP2Q9NVZ3 263 aa12.77□□□□□ -0.37
GPC1-206ENST00000455111 ING3Q9NXR8 418 aa12.77□□□□□ -0.37
GPC1-206ENST00000455111 DPM3Q9P2X0 92 aa12.77□□□□□ -0.37
GPC1-206ENST00000455111 DAPL1A0PJW8 107 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 ODAMA1E959 279 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 BUB1B-PAK6H3BSN5 160 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 J3QLW9 94 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 K7EIL1 84 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 CSN2P05814 226 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 LPLP06858 475 aa12.76□□□□□ -0.37
GPC1-206ENST00000455111 HTR1AP08908 422 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms