RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 RCC2Q9P258 522 aaKnown RBP13.67□□□□□ -0.22
SNX17-204ENST00000453453 LOC107986453A0A1B0GWG9 222 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 A0A1W2PR80 420 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 C5orf49A4QMS7 147 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 SIGLEC5O15389 551 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 BPNT1O95861 308 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 TTRP02766 147 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 LCATP04180 440 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 SERPINA5P05154 406 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 FAM157CP0CG43 387 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 PET100P0DJ07 73 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 CBR1P16152 277 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 CCNOP22674 350 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 ASCL1P50553 236 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 CAV2P51636 162 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 PDZK1IP1Q13113 114 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 TBC1D28Q2M2D7 210 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 PRSS54Q6PEW0 395 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 TMEM88Q6PEY1 159 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 WDR31Q8NA23 367 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 OR8B12Q8NGG6 310 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 OR4A4PQ8NGN8 299 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 PRR7Q8TB68 274 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 NUDCD2Q8WVJ2 157 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 DCUN1D4Q92564 292 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 SCGB3A2Q96PL1 93 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 ZNF251Q9BRH9 671 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 TREM1Q9NP99 234 aa13.66□□□□□ -0.22
SNX17-204ENST00000453453 P2RY10O00398 339 aa13.65□□□□□ -0.22
SNX17-204ENST00000453453 CCSO14618 274 aa13.65□□□□□ -0.22
SNX17-204ENST00000453453 CRYBA1P05813 215 aa13.65□□□□□ -0.22
SNX17-204ENST00000453453 S100A9P06702 114 aaKnown RBP13.65□□□□□ -0.22
SNX17-204ENST00000453453 SPP1P10451 314 aa13.65□□□□□ -0.22
SNX17-204ENST00000453453 PMELP40967 661 aa13.65□□□□□ -0.22
SNX17-204ENST00000453453 FAM189A2Q15884 450 aa13.65□□□□□ -0.22
SNX17-204ENST00000453453 RSPO1Q2MKA7 263 aaPredicted RBP13.65□□□□□ -0.22
SNX17-204ENST00000453453 MST1LQ2TV78 715 aa13.65□□□□□ -0.22
SNX17-204ENST00000453453 MYO7BQ6PIF6 2116 aa13.65□□□□□ -0.22
SNX17-204ENST00000453453 SSX8Q7RTT4 187 aa13.65□□□□□ -0.22
SNX17-204ENST00000453453 PPP1R14AQ96A00 147 aa13.65□□□□□ -0.22
SNX17-204ENST00000453453 S100PBPQ96BU1 408 aa13.65□□□□□ -0.22
SNX17-204ENST00000453453 SEC22AQ96IW7 307 aa13.65□□□□□ -0.22
SNX17-204ENST00000453453 TLNRD1Q9H1K6 362 aa13.65□□□□□ -0.22
SNX17-204ENST00000453453 CDH20Q9HBT6 801 aa13.65□□□□□ -0.22
SNX17-204ENST00000453453 ERRFI1Q9UJM3 462 aaPredicted RBP13.65□□□□□ -0.22
SNX17-204ENST00000453453 RHBDD3Q9Y3P4 386 aa13.65□□□□□ -0.22
SNX17-204ENST00000453453 IGSF10Q6WRI0 2623 aa13.65□□□□□ -0.22
SNX17-204ENST00000453453 NBEAQ8NFP9 2946 aa13.65□□□□□ -0.22
SNX17-204ENST00000453453 A0A0U1RQV5 110 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 C16orf97H3BN30 126 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 MFNGO00587 321 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 SYT7O43581 403 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 PGAM2P15259 253 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 NPBWR1P48145 328 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 IDH3GP51553 393 aaPredicted RBP13.64□□□□□ -0.23
SNX17-204ENST00000453453 FAM27E3Q08E93 113 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 ATXN7L3Q14CW9 347 aaPredicted RBP13.64□□□□□ -0.23
SNX17-204ENST00000453453 GFOD2Q3B7J2 385 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 CDNFQ49AH0 187 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 LRRC37A5PQ49AS3 106 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 TRAPPC6BQ86SZ2 158 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 HOGA1Q86XE5 327 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 ARRDC1Q8N5I2 433 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 PLPP7Q8NBV4 271 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 CCDC54Q8NEL0 328 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 OR13C3Q8NGS6 347 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 RXFP4Q8TDU9 374 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 POM121L2Q96KW2 1035 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 KCNK15Q9H427 330 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 LOC100509620A0A075B734 347 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 MEX3AA1L020 520 aaKnown RBP13.64□□□□□ -0.23
SNX17-204ENST00000453453 UBE2CO00762 179 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 ZNF14P17017 642 aaPredicted RBP13.64□□□□□ -0.23
SNX17-204ENST00000453453 GNLYP22749 145 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 ARHGDIBP52566 201 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 PPA1Q15181 289 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 C4orf17Q53FE4 359 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 BEX5Q5H9J7 111 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 VAX1Q5SQQ9 334 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 DOK3Q7L591 496 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 NAA40Q86UY6 237 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 COMMD1Q8N668 190 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 FAM169BQ8N8A8 192 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 OR51E1Q8TCB6 317 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 MRGPRFQ96AM1 343 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 RGCCQ9H4X1 137 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 TUBA4BQ9H853 241 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 GPR84Q9NQS5 396 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 ZNF391Q9UJN7 358 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 SLC25A15Q9Y619 301 aa13.64□□□□□ -0.23
SNX17-204ENST00000453453 ESPL1Q14674 2120 aa13.63□□□□□ -0.23
SNX17-204ENST00000453453 C5orf51A6NDU8 294 aa13.63□□□□□ -0.23
SNX17-204ENST00000453453 TMEM235A6NFC5 223 aa13.63□□□□□ -0.23
SNX17-204ENST00000453453 C1orf196B1AJZ1 125 aa13.63□□□□□ -0.23
SNX17-204ENST00000453453 RAB27BO00194 218 aa13.63□□□□□ -0.23
SNX17-204ENST00000453453 XRCC2O43543 280 aa13.63□□□□□ -0.23
SNX17-204ENST00000453453 AGFG2O95081 481 aa13.63□□□□□ -0.23
SNX17-204ENST00000453453 IFNA6P05013 189 aa13.63□□□□□ -0.23
SNX17-204ENST00000453453 GSTP1P09211 210 aaKnown RBP13.63□□□□□ -0.23
SNX17-204ENST00000453453 PTAFRP25105 342 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms