RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 FAM90A13PP0C7W8 464 aa11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 FAM90A14PP0C7W9 464 aa11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 FAM90A24PP0C7X0 464 aa11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 CD24P25063 80 aa11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 OR3A1P47881 315 aa11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 RBP2P50120 134 aa11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 CXCR4P61073 352 aa11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 KPNB1Q14974 876 aaKnown RBP11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 C9orf152Q5JTZ5 239 aa11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 FOXRED2Q8IWF2 684 aa11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 FAM58AQ8N1B3 248 aa11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 BATF2Q8N1L9 274 aa11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 TPRX1Q8N7U7 411 aa11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 KLHL30-AS1Q8NEE0 82 aa11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 OR4D6Q8NGJ1 314 aa11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 TRMT10AQ8TBZ6 339 aaKnown RBP11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 BCAS4Q8TDM0 211 aa11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 CHST6Q9GZX3 395 aa11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 COPS3Q9UNS2 423 aa11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 SIRT4Q9Y6E7 314 aaPredicted RBP11.31□□□□□ -0.6
LYSMD3-202ENST00000453259 ZNF670-ZNF695F2Z2N8 137 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 GNGT2O14610 69 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 SH2D1BO14796 132 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 SYT7O43581 403 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 MMP23AO75900 390 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 DCTN3O75935 186 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 CCDC159P0C7I6 412 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 CHATP28329 748 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 PTGFRP43088 359 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 DOC2BQ14184 412 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 UBE2V2Q15819 145 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 C9orf66Q5T8R8 295 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 PRAMEF5Q5TYX0 476 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 C8orf86Q6ZUL3 223 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 CHST4Q8NCG5 386 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 Q8NFD4 153 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 OR5M8Q8NGP6 311 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 OR8U1Q8NH10 309 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 TFAP2CQ92754 450 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 ASB9Q96DX5 294 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 CLN6Q9NWW5 311 aa11.3□□□□□ -0.6
LYSMD3-202ENST00000453259 IGKV1-27A0A075B6S5 117 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 ZNF729A6NN14 1252 aaPredicted RBP11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 SERPINE3A8MV23 424 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 ENTPD6O75354 484 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 IGHG2P01859 326 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 KRT8P05787 483 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 ATP1B3P54709 279 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 NKAPLQ5M9Q1 402 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 TEX38Q6PEX7 206 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 ZNF329Q86UD4 541 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 SLC35F2Q8IXU6 374 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 C5orf56Q8N8D9 126 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 OR9G1Q8NH87 305 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 MUC7Q8TAX7 377 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 TOMM40LQ969M1 308 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 RPEQ96AT9 228 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 LRGUKQ96M69 825 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 ADI1Q9BV57 179 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 ZNF286AQ9HBT8 521 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 EXOSC4Q9NPD3 245 aaKnown RBP11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 ARL8BQ9NVJ2 186 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 OR6C3Q9NZP0 311 aa11.29□□□□□ -0.6
LYSMD3-202ENST00000453259 ODAMA1E959 279 aa11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 CCL24O00175 119 aa11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 UBCP0CG48 685 aaKnown RBP11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 PRKACBP22694 351 aa11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 RAB7AP51149 207 aa11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 NXNL2Q5VZ03 156 aa11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 MEPCEQ7L2J0 689 aaKnown RBP11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 SLC35E3Q7Z769 313 aa11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 CATSPERDQ86XM0 798 aa11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 OR8H3Q8N146 312 aa11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 SPSB1Q96BD6 273 aa11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 APOL4Q9BPW4 351 aa11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 COMMD4Q9H0A8 199 aa11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 NCOR1P1Q9H4R4 102 aa11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 ADGRL4Q9HBW9 690 aa11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 HMG20AQ9NP66 347 aa11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 RBFOX1Q9NWB1 397 aaKnown RBP11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 TVP23BQ9NYZ1 205 aa11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 MRM2Q9UI43 246 aaKnown RBP11.28□□□□□ -0.6
LYSMD3-202ENST00000453259 A6NIN4 97 aa11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 AP4M1O00189 453 aa11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 SULT1C4O75897 302 aa11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 PRKACAP17612 351 aa11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 CDX1P47902 265 aaPredicted RBP11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 INSL3P51460 131 aa11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 MADCAM1Q13477 382 aa11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 KIR2DS1Q14954 304 aa11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 CASC10Q5T4H9 136 aa11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 SLC16A12Q6ZSM3 486 aa11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 LHFPL2Q6ZUX7 228 aa11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 UTS2BQ765I0 119 aa11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 GID4Q8IVV7 300 aa11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 STPG2Q8N412 459 aa11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 RNF152Q8N8N0 203 aa11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 NRBF2Q96F24 287 aa11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 HRASLS5Q96KN8 279 aa11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 TTTY10Q9BZA0 68 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms