RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 EDDM3AQ14507 147 aa12.74□□□□□ -0.37
VPS8-213ENST00000453056 TUSC1Q2TAM9 212 aa12.74□□□□□ -0.37
VPS8-213ENST00000453056 RUSC1-AS1Q66K80 236 aa12.74□□□□□ -0.37
VPS8-213ENST00000453056 RNF144BQ7Z419 303 aa12.74□□□□□ -0.37
VPS8-213ENST00000453056 CHST4Q8NCG5 386 aa12.74□□□□□ -0.37
VPS8-213ENST00000453056 OR4M1Q8NGD0 313 aa12.74□□□□□ -0.37
VPS8-213ENST00000453056 OR5M11Q96RB7 305 aa12.74□□□□□ -0.37
VPS8-213ENST00000453056 UNKLQ9H9P5 680 aaKnown RBP12.74□□□□□ -0.37
VPS8-213ENST00000453056 PCDHB16Q9NRJ7 776 aa12.74□□□□□ -0.37
VPS8-213ENST00000453056 FOXJ3Q9UPW0 622 aa12.74□□□□□ -0.37
VPS8-213ENST00000453056 TMEM82A0PJX8 343 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 FUOMA2VDF0 154 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 SIRPB1O00241 398 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 MGST3O14880 152 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 IGFBP3P17936 291 aaPredicted RBP12.73□□□□□ -0.37
VPS8-213ENST00000453056 TGFBR2P37173 567 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 PTGFRP43088 359 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 OR3A4PP47883 348 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 ACTG1P63261 375 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 MEF2CQ06413 473 aaPredicted RBP12.73□□□□□ -0.37
VPS8-213ENST00000453056 GPR50Q13585 617 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 DOC2BQ14184 412 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 IL13RA2Q14627 380 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 ELP2Q6IA86 826 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 CRIP3Q6Q6R5 217 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 C17orf107Q6ZR85 190 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 PHC2Q8IXK0 858 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 PDZD9Q8IXQ8 264 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 JAGN1Q8N5M9 183 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 Q8N7P7 452 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 NKAIN3Q8N8D7 197 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 TMED9Q9BVK6 235 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 CHST6Q9GZX3 395 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 METTL9Q9H1A3 318 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 NOX4Q9NPH5 578 aa12.73□□□□□ -0.37
VPS8-213ENST00000453056 TRAV8-7A0A075B6U6 113 aa12.72□□□□□ -0.37
VPS8-213ENST00000453056 A0A1W2PPK0 400 aa12.72□□□□□ -0.37
VPS8-213ENST00000453056 hADV38S2A0JD32 116 aa12.72□□□□□ -0.37
VPS8-213ENST00000453056 DNAJC9-AS1A6NH13 148 aa12.72□□□□□ -0.37
VPS8-213ENST00000453056 ZNF780AO75290 641 aaPredicted RBP12.72□□□□□ -0.37
VPS8-213ENST00000453056 OR2H2O95918 312 aa12.72□□□□□ -0.37
VPS8-213ENST00000453056 HSMCR30P0CW71 290 aa12.72□□□□□ -0.37
VPS8-213ENST00000453056 OR3A1P47881 315 aa12.72□□□□□ -0.37
VPS8-213ENST00000453056 GABARAPL2P60520 117 aa12.72□□□□□ -0.37
VPS8-213ENST00000453056 UBA52P62987 128 aaKnown RBP12.72□□□□□ -0.37
VPS8-213ENST00000453056 SCN1BQ07699 218 aa12.72□□□□□ -0.37
VPS8-213ENST00000453056 TBCEQ15813 527 aaPredicted RBP12.72□□□□□ -0.37
VPS8-213ENST00000453056 TMEM200BQ69YZ2 307 aa12.72□□□□□ -0.37
VPS8-213ENST00000453056 ZDHHC22Q8N966 263 aa12.72□□□□□ -0.37
VPS8-213ENST00000453056 SPATA3Q8NHX4 192 aa12.72□□□□□ -0.37
VPS8-213ENST00000453056 FAM216AQ8WUB2 273 aa12.72□□□□□ -0.37
VPS8-213ENST00000453056 ORAI1Q96D31 301 aa12.72□□□□□ -0.37
VPS8-213ENST00000453056 ZNF48Q96MX3 618 aaPredicted RBP12.72□□□□□ -0.37
VPS8-213ENST00000453056 ISYNA1Q9NPH2 558 aa12.72□□□□□ -0.37
VPS8-213ENST00000453056 ESM1Q9NQ30 184 aa12.72□□□□□ -0.37
VPS8-213ENST00000453056 IL36GQ9NZH8 169 aa12.72□□□□□ -0.37
VPS8-213ENST00000453056 SF3B6Q9Y3B4 125 aaKnown RBP12.72□□□□□ -0.37
VPS8-213ENST00000453056 FAM96BQ9Y3D0 163 aa12.72□□□□□ -0.37
VPS8-213ENST00000453056 MEGF11A6BM72 1044 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 RNASEK-C17orf49H0YIS7 233 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 CLDN34H7C241 214 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 DEGS1O15121 323 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 PSPNO60542 156 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 HTR3BO95264 441 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 RBP4P02753 201 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 CSTBP04080 98 aaKnown RBP12.71□□□□□ -0.37
VPS8-213ENST00000453056 ZNF728P0DKX0 622 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 PSMA1P25786 263 aaKnown RBP12.71□□□□□ -0.37
VPS8-213ENST00000453056 UBE2E1P51965 193 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 P2RX3P56373 397 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 ERVFRD-1P60508 538 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 MLLT11Q13015 90 aaPredicted RBP12.71□□□□□ -0.37
VPS8-213ENST00000453056 KLRD1Q13241 179 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 ZNF273Q14593 569 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 TRAM1Q15629 374 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 DEFB112Q30KQ8 113 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 ACSM3Q53FZ2 586 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 LIPKQ5VXJ0 399 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 ASCL4Q6XD76 172 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 ZNF367Q7RTV3 350 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 CDH26Q8IXH8 852 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.71□□□□□ -0.37
VPS8-213ENST00000453056 SLC25A28Q96A46 364 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 ZNF714Q96N38 554 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 NR1H4Q96RI1 486 aaPredicted RBP12.71□□□□□ -0.37
VPS8-213ENST00000453056 PPA2Q9H2U2 334 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 HEXA-AS1Q9H8Q6 139 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 TCF7L1Q9HCS4 588 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 ING4Q9UNL4 249 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 LINC00312Q9Y6C7 94 aa12.71□□□□□ -0.37
VPS8-213ENST00000453056 MDFIC2A0A1B0GVS7 189 aa12.7□□□□□ -0.38
VPS8-213ENST00000453056 MAGEA13PA6NCF6 341 aa12.7□□□□□ -0.38
VPS8-213ENST00000453056 NPFFO15130 113 aa12.7□□□□□ -0.38
VPS8-213ENST00000453056 MRPS14O60783 128 aaKnown RBP12.7□□□□□ -0.38
VPS8-213ENST00000453056 CDRT1O95170 752 aa12.7□□□□□ -0.38
VPS8-213ENST00000453056 PAHP00439 452 aa12.7□□□□□ -0.38
VPS8-213ENST00000453056 MAS1P04201 325 aa12.7□□□□□ -0.38
VPS8-213ENST00000453056 FBP1P09467 338 aa12.7□□□□□ -0.38
VPS8-213ENST00000453056 CCL3L1P16619 93 aa12.7□□□□□ -0.38
VPS8-213ENST00000453056 ERP29P30040 261 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms