RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 TIMM23O14925 209 aa15.7■□□□□ 0.1
USP40-207ENST00000450940 SULT1B1O43704 296 aa15.7■□□□□ 0.1
USP40-207ENST00000450940 OCM2P0CE71 109 aa15.7■□□□□ 0.1
USP40-207ENST00000450940 OCMP0CE72 109 aaPredicted RBP15.7■□□□□ 0.1
USP40-207ENST00000450940 PAX6P26367 422 aa15.7■□□□□ 0.1
USP40-207ENST00000450940 DCKP27707 260 aa15.7■□□□□ 0.1
USP40-207ENST00000450940 KIR2DS4P43632 304 aa15.7■□□□□ 0.1
USP40-207ENST00000450940 ZP1P60852 638 aa15.7■□□□□ 0.1
USP40-207ENST00000450940 EDDM3AQ14507 147 aa15.7■□□□□ 0.1
USP40-207ENST00000450940 CCDC58Q4VC31 144 aa15.7■□□□□ 0.1
USP40-207ENST00000450940 LDLRAD2Q5SZI1 272 aa15.7■□□□□ 0.1
USP40-207ENST00000450940 ZNF691Q5VV52 312 aa15.7■□□□□ 0.1
USP40-207ENST00000450940 ASPHD2Q6ICH7 369 aa15.7■□□□□ 0.1
USP40-207ENST00000450940 LIAT1Q6ZQX7 453 aa15.7■□□□□ 0.1
USP40-207ENST00000450940 RPS4Y2Q8TD47 263 aa15.7■□□□□ 0.1
USP40-207ENST00000450940 MALSU1Q96EH3 234 aa15.7■□□□□ 0.1
USP40-207ENST00000450940 CHST6Q9GZX3 395 aa15.7■□□□□ 0.1
USP40-207ENST00000450940 RAB18Q9NP72 206 aa15.7■□□□□ 0.1
USP40-207ENST00000450940 UBE2J1Q9Y385 318 aaPredicted RBP15.7■□□□□ 0.1
USP40-207ENST00000450940 MEX3AA1L020 520 aaKnown RBP15.69■□□□□ 0.1
USP40-207ENST00000450940 OR2H2O95918 312 aa15.69■□□□□ 0.1
USP40-207ENST00000450940 CALCBP10092 127 aa15.69■□□□□ 0.1
USP40-207ENST00000450940 P2RX3P56373 397 aa15.69■□□□□ 0.1
USP40-207ENST00000450940 KISS1Q15726 138 aa15.69■□□□□ 0.1
USP40-207ENST00000450940 RPL22L1Q6P5R6 122 aaKnown RBP15.69■□□□□ 0.1
USP40-207ENST00000450940 TPRX1Q8N7U7 411 aa15.69■□□□□ 0.1
USP40-207ENST00000450940 CORO2AQ92828 525 aa15.69■□□□□ 0.1
USP40-207ENST00000450940 STMN2Q93045 179 aa15.69■□□□□ 0.1
USP40-207ENST00000450940 FOXRED1Q96CU9 486 aaPredicted RBP15.69■□□□□ 0.1
USP40-207ENST00000450940 CDCA4Q9BXL8 241 aa15.69■□□□□ 0.1
USP40-207ENST00000450940 RANBP3Q9H6Z4 567 aaPredicted RBP15.69■□□□□ 0.1
USP40-207ENST00000450940 EXOSC4Q9NPD3 245 aaKnown RBP15.69■□□□□ 0.1
USP40-207ENST00000450940 C8orf4Q9NR00 106 aa15.69■□□□□ 0.1
USP40-207ENST00000450940 DHDHQ9UQ10 334 aa15.69■□□□□ 0.1
USP40-207ENST00000450940 GSTK1Q9Y2Q3 226 aa15.69■□□□□ 0.1
USP40-207ENST00000450940 SESN1Q9Y6P5 492 aa15.69■□□□□ 0.1
USP40-207ENST00000450940 M0QZ24 198 aa15.68■□□□□ 0.1
USP40-207ENST00000450940 ARG1P05089 322 aa15.68■□□□□ 0.1
USP40-207ENST00000450940 CSN2P05814 226 aa15.68■□□□□ 0.1
USP40-207ENST00000450940 ETV1P50549 477 aa15.68■□□□□ 0.1
USP40-207ENST00000450940 GTF2A1P52655 376 aaPredicted RBP15.68■□□□□ 0.1
USP40-207ENST00000450940 LY6EQ16553 131 aa15.68■□□□□ 0.1
USP40-207ENST00000450940 ELP2Q6IA86 826 aa15.68■□□□□ 0.1
USP40-207ENST00000450940 Q6P435 159 aa15.68■□□□□ 0.1
USP40-207ENST00000450940 PACRGLQ8N7B6 248 aa15.68■□□□□ 0.1
USP40-207ENST00000450940 CHST4Q8NCG5 386 aa15.68■□□□□ 0.1
USP40-207ENST00000450940 OR5D18Q8NGL1 313 aa15.68■□□□□ 0.1
USP40-207ENST00000450940 RGP1Q92546 391 aaPredicted RBP15.68■□□□□ 0.1
USP40-207ENST00000450940 PCDHGB5Q9Y5G0 923 aa15.68■□□□□ 0.1
USP40-207ENST00000450940 A0A0G2JK05 382 aa15.67■□□□□ 0.1
USP40-207ENST00000450940 SIRPB1O00241 398 aa15.67■□□□□ 0.1
USP40-207ENST00000450940 HCKP08631 526 aa15.67■□□□□ 0.1
USP40-207ENST00000450940 GABRA5P31644 462 aa15.67■□□□□ 0.1
USP40-207ENST00000450940 DYNLT3P51808 116 aa15.67■□□□□ 0.1
USP40-207ENST00000450940 EFNB2P52799 333 aa15.67■□□□□ 0.1
USP40-207ENST00000450940 SNU13P55769 128 aaKnown RBP15.67■□□□□ 0.1
USP40-207ENST00000450940 ADARB1P78563 741 aaKnown RBP15.67■□□□□ 0.1
USP40-207ENST00000450940 IL18R1Q13478 541 aa15.67■□□□□ 0.1
USP40-207ENST00000450940 CDK5R1Q15078 307 aa15.67■□□□□ 0.1
USP40-207ENST00000450940 MINOS1Q5TGZ0 78 aa15.67■□□□□ 0.1
USP40-207ENST00000450940 TTC23Q5W5X9 447 aa15.67■□□□□ 0.1
USP40-207ENST00000450940 C11orf88Q6PI97 169 aa15.67■□□□□ 0.1
USP40-207ENST00000450940 Q8NFD4 153 aa15.67■□□□□ 0.1
USP40-207ENST00000450940 PXT1Q8NFP0 134 aa15.67■□□□□ 0.1
USP40-207ENST00000450940 TMEM133Q9H2Q1 129 aa15.67■□□□□ 0.1
USP40-207ENST00000450940 TCF7L1Q9HCS4 588 aa15.67■□□□□ 0.1
USP40-207ENST00000450940 DIMT1Q9UNQ2 313 aaKnown RBP15.67■□□□□ 0.1
USP40-207ENST00000450940 MINOS1-NBL1R4GNA1 71 aa15.67■□□□□ 0.1
USP40-207ENST00000450940 IGHV2-26A0A0B4J1V2 119 aa15.66■□□□□ 0.1
USP40-207ENST00000450940 IRGMA1A4Y4 181 aa15.66■□□□□ 0.1
USP40-207ENST00000450940 FUOMA2VDF0 154 aa15.66■□□□□ 0.1
USP40-207ENST00000450940 OGG1O15527 345 aa15.66■□□□□ 0.1
USP40-207ENST00000450940 CHST1O43916 411 aa15.66■□□□□ 0.1
USP40-207ENST00000450940 CLIC3O95833 236 aa15.66■□□□□ 0.1
USP40-207ENST00000450940 TMEM225BP0DP42 221 aa15.66■□□□□ 0.1
USP40-207ENST00000450940 MTNR1BP49286 362 aa15.66■□□□□ 0.1
USP40-207ENST00000450940 XAF1Q6GPH4 301 aa15.66■□□□□ 0.1
USP40-207ENST00000450940 ASCL4Q6XD76 172 aa15.66■□□□□ 0.1
USP40-207ENST00000450940 TMPRSS11AQ6ZMR5 421 aa15.66■□□□□ 0.1
USP40-207ENST00000450940 DTX3Q8N9I9 347 aa15.66■□□□□ 0.1
USP40-207ENST00000450940 OR4C13Q8NGP0 309 aa15.66■□□□□ 0.1
USP40-207ENST00000450940 CNIH3Q8TBE1 160 aa15.66■□□□□ 0.1
USP40-207ENST00000450940 GPR148Q8TDV2 347 aa15.66■□□□□ 0.1
USP40-207ENST00000450940 TSEN15Q8WW01 171 aaKnown RBP15.66■□□□□ 0.1
USP40-207ENST00000450940 TAS2R3Q9NYW6 316 aa15.66■□□□□ 0.1
USP40-207ENST00000450940 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.66■□□□□ 0.1
USP40-207ENST00000450940 SLC33A1O00400 549 aaPredicted RBP15.65■□□□□ 0.1
USP40-207ENST00000450940 MMP23AO75900 390 aa15.65■□□□□ 0.1
USP40-207ENST00000450940 RAB3AP20336 220 aa15.65■□□□□ 0.1
USP40-207ENST00000450940 SSX2Q16385 188 aa15.65■□□□□ 0.1
USP40-207ENST00000450940 OR2G6Q5TZ20 316 aa15.65■□□□□ 0.1
USP40-207ENST00000450940 HEPN1Q6WQI6 88 aa15.65■□□□□ 0.1
USP40-207ENST00000450940 CPNE2Q96FN4 548 aaPredicted RBP15.65■□□□□ 0.1
USP40-207ENST00000450940 CLEC7AQ9BXN2 247 aa15.65■□□□□ 0.1
USP40-207ENST00000450940 MMP27Q9H306 513 aa15.65■□□□□ 0.1
USP40-207ENST00000450940 BABAM2Q9NXR7 383 aa15.65■□□□□ 0.1
USP40-207ENST00000450940 TCF19Q9Y242 345 aa15.65■□□□□ 0.1
USP40-207ENST00000450940 SIRT4Q9Y6E7 314 aaPredicted RBP15.65■□□□□ 0.1
USP40-207ENST00000450940 TRGV10A0A0A0MS01 117 aa15.64■□□□□ 0.09
USP40-207ENST00000450940 A6NDX4 124 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms