RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 TRIQKQ629K1 86 aa14.18□□□□□ -0.14
PRPF40A-204ENST00000450303 SFRP4Q6FHJ7 346 aaPredicted RBP14.18□□□□□ -0.14
PRPF40A-204ENST00000450303 HAGHLQ6PII5 290 aaPredicted RBP14.18□□□□□ -0.14
PRPF40A-204ENST00000450303 ZNF826PQ6ZT77 177 aa14.18□□□□□ -0.14
PRPF40A-204ENST00000450303 ZSCAN4Q8NAM6 433 aaPredicted RBP14.18□□□□□ -0.14
PRPF40A-204ENST00000450303 DRAXINQ8NBI3 349 aaPredicted RBP14.18□□□□□ -0.14
PRPF40A-204ENST00000450303 OR6M1Q8NGM8 313 aa14.18□□□□□ -0.14
PRPF40A-204ENST00000450303 Q8TCH9 128 aa14.18□□□□□ -0.14
PRPF40A-204ENST00000450303 MRI1Q9BV20 369 aa14.18□□□□□ -0.14
PRPF40A-204ENST00000450303 FGF23Q9GZV9 251 aaPredicted RBP14.18□□□□□ -0.14
PRPF40A-204ENST00000450303 MIXL1Q9H2W2 232 aa14.18□□□□□ -0.14
PRPF40A-204ENST00000450303 C1orf123Q9NWV4 160 aa14.18□□□□□ -0.14
PRPF40A-204ENST00000450303 RNF7Q9UBF6 113 aa14.18□□□□□ -0.14
PRPF40A-204ENST00000450303 FBN3Q75N90 2809 aa14.18□□□□□ -0.14
PRPF40A-204ENST00000450303 SLC17A2O00624 439 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 CD37P11049 281 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 HTR2CP28335 458 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 PTGFRP43088 359 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 INPP1P49441 399 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 IL24Q13007 206 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 PDZK1IP1Q13113 114 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 RAB11BQ15907 218 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 KLF17Q5JT82 389 aaPredicted RBP14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 C1orf100Q5SVJ3 147 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 ANGPTL5Q86XS5 388 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 SAXO1Q8IYX7 474 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 SCCPDHQ8NBX0 429 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 OR8B3Q8NGG8 313 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 TNFAIP8L1Q8WVP5 186 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 RFT1Q96AA3 541 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 OR8B2Q96RD0 313 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 SUCNR1Q9BXA5 334 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 TLNRD1Q9H1K6 362 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 CNTD2Q9H8S5 307 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 GHRLQ9UBU3 117 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 ZNF69Q9UC07 566 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 ING4Q9UNL4 249 aa14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 MRPS28Q9Y2Q9 187 aaKnown RBP14.17□□□□□ -0.14
PRPF40A-204ENST00000450303 IGKV1-27A0A075B6S5 117 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 IGHV3OR16-10A0A075B7F0 116 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 hCG_1807616A0A1W2PRN6 198 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 SMIM30A4D0T7 59 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 IFITM5A6NNB3 132 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 C3orf80F5H4A9 247 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 CDIPTO14735 213 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 PLATP00750 562 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 UBBP0CG47 229 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 IL7P13232 177 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 FPR2P25090 351 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 PITPNBP48739 271 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 CAV3P56539 151 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 OR10A3P58181 314 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 PAX2Q02962 417 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 PAX8Q06710 450 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 GPR176Q14439 515 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 AWAT2Q6E213 333 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 SFXN4Q6P4A7 337 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 CNIH2Q6PI25 160 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 SLC25A26Q70HW3 274 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 WDR86Q86TI4 376 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 BCL6BQ8N143 479 aaPredicted RBP14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 PXT1Q8NFP0 134 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 OR10Z1Q8NGY1 313 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 AQP3Q92482 292 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 METTL9Q9H1A3 318 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 ELL3Q9HB65 397 aaPredicted RBP14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 ESM1Q9NQ30 184 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 RABL2AQ9UBK7 228 aaPredicted RBP14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 STEAP1Q9UHE8 339 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 NUP50Q9UKX7 468 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 RABL2BQ9UNT1 228 aa14.16□□□□□ -0.14
PRPF40A-204ENST00000450303 TRIM77I1YAP6 450 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 HAX1O00165 279 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 AIPO00170 330 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 HPGDSO60760 199 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 ZNF780AO75290 641 aaPredicted RBP14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 MPZP25189 248 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 OR3A4PP47883 348 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 ACTG1P63261 375 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 IL18Q14116 193 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 HES5Q5TA89 166 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 MZT2BQ6NZ67 158 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 BAIAP2L2Q6UXY1 529 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 NLRC3Q7RTR2 1065 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 CALHM1Q8IU99 346 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 Q8IYB0 196 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 OR5D18Q8NGL1 313 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 RAB40AQ8WXH6 277 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 SDHCQ99643 169 aaPredicted RBP14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 GFI1Q99684 422 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 RHOFQ9HBH0 211 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 ABRACLQ9P1F3 81 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 CLN8Q9UBY8 286 aa14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 SOX21Q9Y651 276 aaPredicted RBP14.15□□□□□ -0.14
PRPF40A-204ENST00000450303 IGHV2-70DA0A0C4DH43 119 aa14.14□□□□□ -0.15
PRPF40A-204ENST00000450303 LGALS8O00214 317 aa14.14□□□□□ -0.15
PRPF40A-204ENST00000450303 SPRY1O43609 319 aaPredicted RBP14.14□□□□□ -0.15
PRPF40A-204ENST00000450303 FSTL3O95633 263 aa14.14□□□□□ -0.15
PRPF40A-204ENST00000450303 CSTBP04080 98 aaKnown RBP14.14□□□□□ -0.15
PRPF40A-204ENST00000450303 ACAA1P09110 424 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms