RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 E9PI62 339 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 SULT1B1O43704 296 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 OR2H2O95918 312 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 IGKV1D-12P01611 117 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 TMEM225BP0DP42 221 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 ZNF44P15621 663 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 P2RX3P56373 397 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 SCN1BQ07699 218 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 FAM189A2Q15884 450 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 SSX2Q16385 188 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 LPCAT4Q643R3 524 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 ZNF626Q68DY1 528 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 ASPHD2Q6ICH7 369 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 TCF23Q7RTU1 214 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 SAXO1Q8IYX7 474 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 APH1BQ8WW43 257 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 MALSU1Q96EH3 234 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 CPNE2Q96FN4 548 aaPredicted RBP12.38□□□□□ -0.43
CHD3-205ENST00000449744 PDCD1LG2Q9BQ51 273 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 ZNF649Q9BS31 505 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 NPFFR1Q9GZQ6 430 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 SESN1Q9Y6P5 492 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 TRGV10A0A0A0MS01 117 aa12.37□□□□□ -0.43
CHD3-205ENST00000449744 ODF3BA8MYP8 253 aa12.37□□□□□ -0.43
CHD3-205ENST00000449744 MAGEB3O15480 346 aa12.37□□□□□ -0.43
CHD3-205ENST00000449744 ALX3O95076 343 aa12.37□□□□□ -0.43
CHD3-205ENST00000449744 ERP29P30040 261 aaKnown RBP12.37□□□□□ -0.43
CHD3-205ENST00000449744 KIR2DS4P43632 304 aa12.37□□□□□ -0.43
CHD3-205ENST00000449744 OR3A1P47881 315 aa12.37□□□□□ -0.43
CHD3-205ENST00000449744 KISS1Q15726 138 aa12.37□□□□□ -0.43
CHD3-205ENST00000449744 C11orf88Q6PI97 169 aa12.37□□□□□ -0.43
CHD3-205ENST00000449744 PARP16Q8N5Y8 322 aa12.37□□□□□ -0.43
CHD3-205ENST00000449744 OR2T6Q8NHC8 308 aa12.37□□□□□ -0.43
CHD3-205ENST00000449744 RPS4Y2Q8TD47 263 aa12.37□□□□□ -0.43
CHD3-205ENST00000449744 NKX3-1Q99801 234 aaPredicted RBP12.37□□□□□ -0.43
CHD3-205ENST00000449744 MMP27Q9H306 513 aa12.37□□□□□ -0.43
CHD3-205ENST00000449744 RANBP3Q9H6Z4 567 aaPredicted RBP12.37□□□□□ -0.43
CHD3-205ENST00000449744 FGF20Q9NP95 211 aaPredicted RBP12.37□□□□□ -0.43
CHD3-205ENST00000449744 UBE2J1Q9Y385 318 aaPredicted RBP12.37□□□□□ -0.43
CHD3-205ENST00000449744 IRGMA1A4Y4 181 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 VGLL3A8MV65 326 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 LIMS3P0CW19 117 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 LIMS4P0CW20 117 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 RAB3AP20336 220 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 LMO1P25800 156 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 SOX2P48431 317 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 GTF2A1P52655 376 aaPredicted RBP12.36□□□□□ -0.43
CHD3-205ENST00000449744 SMN1Q16637 294 aaKnown RBP12.36□□□□□ -0.43
CHD3-205ENST00000449744 LRRC36Q1X8D7 754 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 ZNF691Q5VV52 312 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 TMPRSS11AQ6ZMR5 421 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 Q6ZTK2 550 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 RNF144BQ7Z419 303 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 DYNAPQ8N1N2 210 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 NDNFQ8TB73 568 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 PIFOQ8TCI5 191 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 GPER1Q99527 375 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 CLEC7AQ9BXN2 247 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 TMEM133Q9H2Q1 129 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 GAL3ST2Q9H3Q3 398 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 PITPNC1Q9UKF7 332 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 TCF19Q9Y242 345 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 SIGLEC9Q9Y336 463 aa12.36□□□□□ -0.43
CHD3-205ENST00000449744 IGHV2-26A0A0B4J1V2 119 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 DEGS1O15121 323 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 RRP9O43818 475 aaKnown RBP12.35□□□□□ -0.43
CHD3-205ENST00000449744 WBP4O75554 376 aaKnown RBP12.35□□□□□ -0.43
CHD3-205ENST00000449744 CD2P06729 351 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 DCKP27707 260 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 MTNR1BP49286 362 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 RAB13P51153 203 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 ZP1P60852 638 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 AESQ08117 197 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 CCDC58Q4VC31 144 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 MINOS1Q5TGZ0 78 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 TTC23Q5W5X9 447 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 OR52W1Q6IF63 320 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 RPL22L1Q6P5R6 122 aaKnown RBP12.35□□□□□ -0.43
CHD3-205ENST00000449744 CRIP3Q6Q6R5 217 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 SATL1Q86VE3 508 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 CHST4Q8NCG5 386 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 CNIH3Q8TBE1 160 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 GPR148Q8TDV2 347 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 CYGBQ8WWM9 190 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 JAM3Q9BX67 310 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 CDCA4Q9BXL8 241 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 C8orf4Q9NR00 106 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 ING3Q9NXR8 418 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 HILPDAQ9Y5L2 63 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 MINOS1-NBL1R4GNA1 71 aa12.35□□□□□ -0.43
CHD3-205ENST00000449744 DSCAML1Q8TD84 2053 aa12.34□□□□□ -0.43
CHD3-205ENST00000449744 A0A0G2JK05 382 aa12.34□□□□□ -0.43
CHD3-205ENST00000449744 H3BUI4 141 aa12.34□□□□□ -0.43
CHD3-205ENST00000449744 CHST1O43916 411 aa12.34□□□□□ -0.43
CHD3-205ENST00000449744 CLIC3O95833 236 aa12.34□□□□□ -0.43
CHD3-205ENST00000449744 MYL12AP19105 171 aa12.34□□□□□ -0.43
CHD3-205ENST00000449744 GLIPR1P48060 266 aa12.34□□□□□ -0.43
CHD3-205ENST00000449744 ETV1P50549 477 aa12.34□□□□□ -0.43
CHD3-205ENST00000449744 EFNB2P52799 333 aa12.34□□□□□ -0.43
CHD3-205ENST00000449744 SLC34A1Q06495 639 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms