RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 IGKV1-12A0A0C4DH73 117 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 TCRBV4S1A1TA0A5B7 111 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 FAM172BPA6NC97 362 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 IGKV1D-12P01611 117 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 LPLP06858 475 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 FCGR1AP12314 374 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 GABRB1P18505 474 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 BCL3P20749 454 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 GABRR1P24046 479 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 HTR1DP28221 377 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 PEX2P28328 305 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 SNU13P55769 128 aaKnown RBP11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 ZIK1Q3SY52 487 aaPredicted RBP11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 ABCA11PQ4W5N1 156 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 PRAMEF5Q5TYX0 476 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 CENPVQ7Z7K6 275 aaPredicted RBP11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 ABHD12Q8N2K0 398 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 OR2G2Q8NGZ5 317 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 BORCS8Q96FH0 119 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 HRASLS5Q96KN8 279 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 ZNF649Q9BS31 505 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 GNG8Q9UK08 70 aa11.3□□□□□ -0.6
SMARCAL1-210ENST00000445153 IGLV1-47P01700 117 aa11.29□□□□□ -0.6
SMARCAL1-210ENST00000445153 PF4V1P10720 104 aa11.29□□□□□ -0.6
SMARCAL1-210ENST00000445153 AZGP1P25311 298 aaKnown RBP11.29□□□□□ -0.6
SMARCAL1-210ENST00000445153 RASSF2P50749 326 aa11.29□□□□□ -0.6
SMARCAL1-210ENST00000445153 P2RX3P56373 397 aa11.29□□□□□ -0.6
SMARCAL1-210ENST00000445153 KPNB1Q14974 876 aaKnown RBP11.29□□□□□ -0.6
SMARCAL1-210ENST00000445153 ZNF146Q15072 292 aa11.29□□□□□ -0.6
SMARCAL1-210ENST00000445153 FAM58AQ8N1B3 248 aa11.29□□□□□ -0.6
SMARCAL1-210ENST00000445153 LIN7BQ9HAP6 207 aa11.29□□□□□ -0.6
SMARCAL1-210ENST00000445153 PLEKHA1Q9HB21 404 aa11.29□□□□□ -0.6
SMARCAL1-210ENST00000445153 DPM3Q9P2X0 92 aa11.29□□□□□ -0.6
SMARCAL1-210ENST00000445153 HHLA2Q9UM44 414 aa11.29□□□□□ -0.6
SMARCAL1-210ENST00000445153 COL7A1Q02388 2944 aa11.29□□□□□ -0.6
SMARCAL1-210ENST00000445153 SIRPB1O00241 398 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 MGST3O14880 152 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 ATP5HO75947 161 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 ALDOBP05062 364 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 PRKACAP17612 351 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 ERP29P30040 261 aaKnown RBP11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 HOXD3P31249 432 aaPredicted RBP11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 GLIPR1P48060 266 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 POU3F4P49335 361 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 BDH1Q02338 343 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 DEFB121Q5J5C9 76 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 STMN2Q93045 179 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 RFT1Q96AA3 541 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 LGALS12Q96DT0 336 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 RNFT2Q96EX2 444 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 PELI1Q96FA3 418 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 RBM14Q96PK6 669 aaKnown RBP11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 SPACA5Q96QH8 159 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 SLC29A1Q99808 456 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 SLC25A33Q9BSK2 321 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 ZNF286AQ9HBT8 521 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 ENOPH1Q9UHY7 261 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 MYRFQ9Y2G1 1151 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 UBE2J1Q9Y385 318 aaPredicted RBP11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 TSSC4Q9Y5U2 329 aaPredicted RBP11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 DNAH9Q9NYC9 4486 aa11.28□□□□□ -0.6
SMARCAL1-210ENST00000445153 TRBV2A0A0J9YWF9 115 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 OR4C45A6NMZ5 311 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 E9PI62 339 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 LY6LH3BQJ8 138 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 SLC16A6O15403 523 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 GATBO75879 557 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 OR2H2O95918 312 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 PF4P02776 101 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 VSIG8P0DPA2 414 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 CDK2P24941 298 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 RBP2P50120 134 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 ATP1B3P54709 279 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 CDC42P60953 191 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 SNRPGP62308 76 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 AESQ08117 197 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 TMED1Q13445 227 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 SLC25A30Q5SVS4 291 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 FDX2Q6P4F2 183 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 ZBTB49Q6ZSB9 765 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 C16orf82Q7Z2V1 217 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 TRAPPC6BQ86SZ2 158 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 ENTHD1Q8IYW4 607 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 CBR4Q8N4T8 237 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 DNAAF1Q8NEP3 725 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 CORO2AQ92828 525 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 FGGYQ96C11 551 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 ISG20L2Q9H9L3 353 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 HMG20AQ9NP66 347 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 GSTK1Q9Y2Q3 226 aa11.27□□□□□ -0.61
SMARCAL1-210ENST00000445153 OR2F2O95006 317 aa11.26□□□□□ -0.61
SMARCAL1-210ENST00000445153 SERPINA3P01011 423 aa11.26□□□□□ -0.61
SMARCAL1-210ENST00000445153 UBCP0CG48 685 aaKnown RBP11.26□□□□□ -0.61
SMARCAL1-210ENST00000445153 ATF1P18846 271 aa11.26□□□□□ -0.61
SMARCAL1-210ENST00000445153 BRS3P32247 399 aa11.26□□□□□ -0.61
SMARCAL1-210ENST00000445153 ATP6V1E1P36543 226 aa11.26□□□□□ -0.61
SMARCAL1-210ENST00000445153 MTCP1P56278 107 aa11.26□□□□□ -0.61
SMARCAL1-210ENST00000445153 SLC35A2P78381 396 aa11.26□□□□□ -0.61
SMARCAL1-210ENST00000445153 EGFEM1PQ0D2K5 195 aa11.26□□□□□ -0.61
SMARCAL1-210ENST00000445153 PDZK1IP1Q13113 114 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms