RNA–Protein interactions for RNA: ENST00000443203.5

NELFA-208, Transcript of negative elongation factor complex member A, human

TSL 4

Gene NELFA, Length 553 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFA-208	ENST00000443203	URM1	Q9BTM9	101 aa	Known RBP	11.76	□□□□□ -0.53
NELFA-208	ENST00000443203	SELENOI	Q9C0D9	397 aa		11.76	□□□□□ -0.53
NELFA-208	ENST00000443203	LIN7B	Q9HAP6	207 aa		11.76	□□□□□ -0.53
NELFA-208	ENST00000443203	IGKV1D-17	A0A075B6S4	117 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	VSIG8	P0DPA2	414 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	ZNF44	P15621	663 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	DUSP1	P28562	367 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	PITPNB	P48739	271 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	LMO4	P61968	165 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	SCN1B	Q07699	218 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	IKZF1	Q13422	519 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	MPV17L	Q2QL34	196 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	NHLRC3	Q5JS37	347 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	LYPD2	Q6UXB3	125 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	NR2C2AP	Q86WQ0	139 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	CD177	Q8N6Q3	437 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	FAM46B	Q96A09	425 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	SLC25A46	Q96AG3	418 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	ISOC1	Q96CN7	298 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	C1orf147	Q96MC9	270 aa	Predicted RBP	11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	TMEM59	Q9BXS4	323 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	BANF2	Q9H503	90 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	ABRACL	Q9P1F3	81 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	CLN8	Q9UBY8	286 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	RSL24D1	Q9UHA3	163 aa	Known RBP	11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	ZNF222	Q9UK12	451 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203	RAB22A	Q9UL26	194 aa		11.75	□□□□□ -0.53
NELFA-208	ENST00000443203		A0A096LNT2	108 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203		A0A1W2PP11	408 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203		A8MV72	311 aa	Predicted RBP	11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	TMEM14DP	A8MWL7	114 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203		F5H0A9	414 aa	Predicted RBP	11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	GPR37	O15354	613 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	SIGLEC5	O15389	551 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	FOXH1	O75593	365 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	OR7C1	O76099	320 aa	Predicted RBP	11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	SLC2A2	P11168	524 aa	Predicted RBP	11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	SOX6	P35712	828 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	GZMK	P49863	264 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	RBM11	P57052	281 aa	Known RBP	11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	SCAND1	P57086	179 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	GNB2	P62879	340 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	COL10A1	Q03692	680 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	TAF9	Q16594	264 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	PIGY	Q3MUY2	71 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	CHRFAM7A	Q494W8	412 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	OR10K2	Q6IF99	312 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	ASCC1	Q8N9N2	400 aa	Known RBP	11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	CHST4	Q8NCG5	386 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	TMEM104	Q8NE00	496 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	TMEM185A	Q8NFB2	350 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	OR5D13	Q8NGL4	314 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	NDNF	Q8TB73	568 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	AP3S1	Q92572	193 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	SNX22	Q96L94	193 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	GAFA1	Q96PS6	74 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	FAM234A	Q9H0X4	552 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	SPACA1	Q9HBV2	294 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	IL36RN	Q9UBH0	155 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	SLC25A10	Q9UBX3	287 aa	Predicted RBP	11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	FBLN5	Q9UBX5	448 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	MAB21L2	Q9Y586	359 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	MXRA5	Q9NR99	2828 aa		11.74	□□□□□ -0.53
NELFA-208	ENST00000443203	TMEM272	A0A1B0GTI8	110 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	METTL21EP	A6NDL7	271 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	FAM90A10P	A6NDY2	464 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	FAM90A18P	A6NE21	464 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	FAM90A16P	A6NEW6	464 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	FAM90A20P	A6NIJ5	464 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	FAM90A8P	A6NJQ4	464 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	FAM90A7P	A6NKC0	464 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	FAM90A22P	A8MWA6	464 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	FAM90A12P	A8MX19	464 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	FAM90A5P	A8MXJ8	464 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	FAM90A23P	A8MXZ1	464 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203		H3BMQ9	156 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	ZNF701	M0R085	212 aa	Predicted RBP	11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	SIRPB1	O00241	398 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	DVL1	O14640	695 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	GEMIN2	O14893	280 aa	Known RBP	11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	ABCA1	O95477	2261 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	OR2H2	O95918	312 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	FAM90A15P	P0C7V4	464 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	FAM90A13P	P0C7W8	464 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	FAM90A14P	P0C7W9	464 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	FAM90A24P	P0C7X0	464 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	NDUFB7	P17568	137 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	AMY2B	P19961	511 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	RAB6A	P20340	208 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	GABRR1	P24046	479 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	LMO1	P25800	156 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	CEBPD	P49716	269 aa	Predicted RBP	11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	RPS27A	P62979	156 aa	Known RBP	11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	QRFP	P83859	136 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	ATAD3C	Q5T2N8	411 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	CD276	Q5ZPR3	534 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	FAM216B	Q8N7L0	139 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	PTX4	Q96A99	478 aa		11.73	□□□□□ -0.53
NELFA-208	ENST00000443203	KCTD12	Q96CX2	325 aa	Known RBP	11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms