RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 SBSPONQ8IVN8 264 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 Q8IYB0 196 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 OR5M8Q8NGP6 311 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 LINC00527Q9UJ94 153 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 OR52A1Q9UKL2 312 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 SLC7A11Q9UPY5 501 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 TMEM14AQ9Y6G1 99 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 R4GMQ9 66 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 TRGV10A0A0A0MS01 117 aa11.3□□□□□ -0.6
HMGN1-208ENST00000443046 SERPINE3A8MV23 424 aa11.3□□□□□ -0.6
HMGN1-208ENST00000443046 LOC110117498-PIK3R3F6TDL0 507 aa11.3□□□□□ -0.6
HMGN1-208ENST00000443046 ENTPD6O75354 484 aa11.3□□□□□ -0.6
HMGN1-208ENST00000443046 MRPL3P09001 348 aaKnown RBP11.3□□□□□ -0.6
HMGN1-208ENST00000443046 DUSP1P28562 367 aa11.3□□□□□ -0.6
HMGN1-208ENST00000443046 FUT6P51993 359 aa11.3□□□□□ -0.6
HMGN1-208ENST00000443046 PRRX1P54821 245 aa11.3□□□□□ -0.6
HMGN1-208ENST00000443046 CDC42P60953 191 aa11.3□□□□□ -0.6
HMGN1-208ENST00000443046 RPS7P62081 194 aaKnown RBP11.3□□□□□ -0.6
HMGN1-208ENST00000443046 SLC35B1P78383 322 aa11.3□□□□□ -0.6
HMGN1-208ENST00000443046 BCL2L15Q5TBC7 163 aa11.3□□□□□ -0.6
HMGN1-208ENST00000443046 STPG2Q8N412 459 aa11.3□□□□□ -0.6
HMGN1-208ENST00000443046 RNF152Q8N8N0 203 aa11.3□□□□□ -0.6
HMGN1-208ENST00000443046 OR8U1Q8NH10 309 aa11.3□□□□□ -0.6
HMGN1-208ENST00000443046 GIPC3Q8TF64 312 aa11.3□□□□□ -0.6
HMGN1-208ENST00000443046 EMG1Q92979 244 aaKnown RBP11.3□□□□□ -0.6
HMGN1-208ENST00000443046 RBFOX1Q9NWB1 397 aaKnown RBP11.3□□□□□ -0.6
HMGN1-208ENST00000443046 ZNF256Q9Y2P7 627 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-208ENST00000443046 TRBV2A0A0J9YWF9 115 aa11.29□□□□□ -0.6
HMGN1-208ENST00000443046 LINC01548A6NM66 108 aa11.29□□□□□ -0.6
HMGN1-208ENST00000443046 TOR1AO14656 332 aa11.29□□□□□ -0.6
HMGN1-208ENST00000443046 INMTO95050 263 aa11.29□□□□□ -0.6
HMGN1-208ENST00000443046 CDX1P47902 265 aaPredicted RBP11.29□□□□□ -0.6
HMGN1-208ENST00000443046 NPBWR2P48146 333 aa11.29□□□□□ -0.6
HMGN1-208ENST00000443046 RAB25P57735 213 aa11.29□□□□□ -0.6
HMGN1-208ENST00000443046 FHL3Q13643 280 aa11.29□□□□□ -0.6
HMGN1-208ENST00000443046 DEFB136Q30KP8 78 aa11.29□□□□□ -0.6
HMGN1-208ENST00000443046 SPIN3Q5JUX0 258 aa11.29□□□□□ -0.6
HMGN1-208ENST00000443046 TEX38Q6PEX7 206 aa11.29□□□□□ -0.6
HMGN1-208ENST00000443046 FAM58AQ8N1B3 248 aa11.29□□□□□ -0.6
HMGN1-208ENST00000443046 APOL4Q9BPW4 351 aa11.29□□□□□ -0.6
HMGN1-208ENST00000443046 TTTY10Q9BZA0 68 aa11.29□□□□□ -0.6
HMGN1-208ENST00000443046 PCDHB16Q9NRJ7 776 aa11.29□□□□□ -0.6
HMGN1-208ENST00000443046 IKZF2Q9UKS7 526 aa11.29□□□□□ -0.6
HMGN1-208ENST00000443046 SNX5Q9Y5X3 404 aa11.29□□□□□ -0.6
HMGN1-208ENST00000443046 SMAD5-AS1Q9Y6J3 95 aa11.29□□□□□ -0.6
HMGN1-208ENST00000443046 A0A1W2PPI3 338 aa11.28□□□□□ -0.6
HMGN1-208ENST00000443046 SEC14L6B5MCN3 397 aa11.28□□□□□ -0.6
HMGN1-208ENST00000443046 MAGEB4O15481 346 aaPredicted RBP11.28□□□□□ -0.6
HMGN1-208ENST00000443046 RPLP1P05386 114 aaKnown RBP11.28□□□□□ -0.6
HMGN1-208ENST00000443046 CGB3P0DN86 165 aa11.28□□□□□ -0.6
HMGN1-208ENST00000443046 CGB7P0DN87 165 aa11.28□□□□□ -0.6
HMGN1-208ENST00000443046 OSMP13725 252 aa11.28□□□□□ -0.6
HMGN1-208ENST00000443046 GLIPR1P48060 266 aa11.28□□□□□ -0.6
HMGN1-208ENST00000443046 C17orf58Q2M2W7 97 aa11.28□□□□□ -0.6
HMGN1-208ENST00000443046 ZNF322Q6U7Q0 402 aaPredicted RBP11.28□□□□□ -0.6
HMGN1-208ENST00000443046 SLC35E3Q7Z769 313 aa11.28□□□□□ -0.6
HMGN1-208ENST00000443046 TMEM179BQ7Z7N9 219 aa11.28□□□□□ -0.6
HMGN1-208ENST00000443046 OR56B4Q8NH76 319 aa11.28□□□□□ -0.6
HMGN1-208ENST00000443046 CHST5Q9GZS9 411 aa11.28□□□□□ -0.6
HMGN1-208ENST00000443046 GLS2Q9UI32 602 aa11.28□□□□□ -0.6
HMGN1-208ENST00000443046 MRM2Q9UI43 246 aaKnown RBP11.28□□□□□ -0.6
HMGN1-208ENST00000443046 GTF2A1LQ9UNN4 478 aa11.28□□□□□ -0.6
HMGN1-208ENST00000443046 CSN2P05814 226 aa11.27□□□□□ -0.61
HMGN1-208ENST00000443046 BCL3P20749 454 aa11.27□□□□□ -0.61
HMGN1-208ENST00000443046 CXCR4P61073 352 aa11.27□□□□□ -0.61
HMGN1-208ENST00000443046 EBI3Q14213 229 aa11.27□□□□□ -0.61
HMGN1-208ENST00000443046 KPNB1Q14974 876 aaKnown RBP11.27□□□□□ -0.61
HMGN1-208ENST00000443046 PNLIPRP3Q17RR3 467 aa11.27□□□□□ -0.61
HMGN1-208ENST00000443046 PLEKHG7Q6ZR37 379 aa11.27□□□□□ -0.61
HMGN1-208ENST00000443046 LCNL1Q6ZST4 164 aa11.27□□□□□ -0.61
HMGN1-208ENST00000443046 FOXRED2Q8IWF2 684 aa11.27□□□□□ -0.61
HMGN1-208ENST00000443046 DEFB107AQ8IZN7 70 aa11.27□□□□□ -0.61
HMGN1-208ENST00000443046 DRAM1Q8N682 238 aa11.27□□□□□ -0.61
HMGN1-208ENST00000443046 OR9G1Q8NH87 305 aa11.27□□□□□ -0.61
HMGN1-208ENST00000443046 CITED4Q96RK1 184 aa11.27□□□□□ -0.61
HMGN1-208ENST00000443046 KRTAP17-1Q9BYP8 105 aa11.27□□□□□ -0.61
HMGN1-208ENST00000443046 SLC25A19Q9HC21 320 aa11.27□□□□□ -0.61
HMGN1-208ENST00000443046 HMG20AQ9NP66 347 aa11.27□□□□□ -0.61
HMGN1-208ENST00000443046 ODAMA1E959 279 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 FUOMA2VDF0 154 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 SIRPB1O00241 398 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 CCRL2O00421 344 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 GATBO75879 557 aaKnown RBP11.26□□□□□ -0.61
HMGN1-208ENST00000443046 OR2H2O95918 312 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 TMEM11P17152 192 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 PTGFRP43088 359 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 AESQ08117 197 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 FOXE3Q13461 319 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 DIAPH2-AS1Q14236 149 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 RBM39Q14498 530 aaKnown RBP11.26□□□□□ -0.61
HMGN1-208ENST00000443046 TMEM236Q5W0B7 351 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 CATSPERDQ86XM0 798 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 DNAAF1Q8NEP3 725 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 OR4D6Q8NGJ1 314 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 TOMM40LQ969M1 308 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 RPEQ96AT9 228 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 BORCS8Q96FH0 119 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 COQ2Q96H96 371 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 KIRREL1Q96J84 757 aa11.26□□□□□ -0.61
HMGN1-208ENST00000443046 SIRT4Q9Y6E7 314 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms