RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 RNF166Q96A37 237 aaPredicted RBP7.27□□□□□ -1.25
USP6NL-203ENST00000443016 FAM71F1Q96KD3 344 aaPredicted RBP7.27□□□□□ -1.25
USP6NL-203ENST00000443016 SLC35D1Q9NTN3 355 aa7.27□□□□□ -1.25
USP6NL-203ENST00000443016 SF3B6Q9Y3B4 125 aaKnown RBP7.27□□□□□ -1.25
USP6NL-203ENST00000443016 PKD1L1Q8TDX9 2849 aa7.27□□□□□ -1.25
USP6NL-203ENST00000443016 SLC22A1O15245 554 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 TOX4O94842 621 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 CCL1P22362 96 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 FGF9P31371 208 aaPredicted RBP7.26□□□□□ -1.25
USP6NL-203ENST00000443016 MAP2K3P46734 347 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 COMPP49747 757 aaPredicted RBP7.26□□□□□ -1.25
USP6NL-203ENST00000443016 LGALS4P56470 323 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 FABP5Q01469 135 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 ACSM3Q53FZ2 586 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 CD200R1LQ6Q8B3 271 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 CEACAM19Q7Z692 300 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 PIGCQ92535 297 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 TMEM106AQ96A25 262 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 C10orf35Q96D05 121 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 KCTD7Q96MP8 289 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 OR14A2Q96R54 314 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 RTL8AQ9BWD3 113 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 OR51E2Q9H255 320 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 NEK6Q9HC98 313 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 CTSZQ9UBR2 303 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 DNAJB11Q9UBS4 358 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 KCNK7Q9Y2U2 307 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 MPC1Q9Y5U8 109 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 TRBV5-5A0A0J9YX44 114 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 ZNF850A8MQ14 1090 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 ZNF561-AS1K7EIQ3 104 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 DVL1O14640 695 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 MUC1P15941 1255 aaPredicted RBP7.26□□□□□ -1.25
USP6NL-203ENST00000443016 SOX2P48431 317 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 FOXL1Q12952 345 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 PRDX4Q13162 271 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 HSD17B12Q53GQ0 312 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 WDR82Q6UXN9 313 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 SLC36A1Q7Z2H8 476 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 OR13C5Q8NGS8 318 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 RGP1Q92546 391 aaPredicted RBP7.26□□□□□ -1.25
USP6NL-203ENST00000443016 DACT3Q96B18 629 aaPredicted RBP7.26□□□□□ -1.25
USP6NL-203ENST00000443016 ISOC1Q96CN7 298 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 ITPKCQ96DU7 683 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 ZNF48Q96MX3 618 aaPredicted RBP7.26□□□□□ -1.25
USP6NL-203ENST00000443016 PPP1R3EQ9H7J1 279 aa7.26□□□□□ -1.25
USP6NL-203ENST00000443016 LHBP01229 141 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 IGLV3-1P01715 115 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 SFTPBP07988 381 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 OCMP0CE72 109 aaPredicted RBP7.25□□□□□ -1.25
USP6NL-203ENST00000443016 EGR1P18146 543 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 PPP3R1P63098 170 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 AWAT1Q58HT5 328 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 C22orf42Q6IC83 251 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 WDR86Q86TI4 376 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 RDH10Q8IZV5 341 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 PP6455Q8WZ26 134 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 RNF170Q96K19 258 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 DERL3Q96Q80 235 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 CCL13Q99616 98 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 CDIP1Q9H305 208 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 ABCB9Q9NP78 766 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 TNFRSF19Q9NS68 423 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 TXNL4BQ9NX01 149 aaKnown RBP7.25□□□□□ -1.25
USP6NL-203ENST00000443016 CHTOPQ9Y3Y2 248 aaKnown RBP7.25□□□□□ -1.25
USP6NL-203ENST00000443016 SOX21Q9Y651 276 aaPredicted RBP7.25□□□□□ -1.25
USP6NL-203ENST00000443016 CEPT1Q9Y6K0 416 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 A0A1B0GTI1 187 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 H3BSH0 61 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 GPX5O75715 221 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 SC5DO75845 299 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 ECDO95905 644 aaPredicted RBP7.25□□□□□ -1.25
USP6NL-203ENST00000443016 UCHL1P09936 223 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 ACKR3P25106 362 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 RPS11P62280 158 aaKnown RBP eCLIP7.25□□□□□ -1.25
USP6NL-203ENST00000443016 LSM3P62310 102 aaKnown RBP7.25□□□□□ -1.25
USP6NL-203ENST00000443016 ARF6P62330 175 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 RIPPLY1Q0D2K3 151 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 IKZF1Q13422 519 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 SLC9A3R2Q15599 337 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 TEX36Q5VZQ5 186 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 PET117Q6UWS5 81 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 SLC16A12Q6ZSM3 486 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 C9orf139Q6ZV77 190 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 C11orf53Q8IXP5 236 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 ZDHHC23Q8IYP9 409 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 OR5T2Q8NGG2 359 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 OR51A4Q8NGJ6 313 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 RPL3LQ92901 407 aaKnown RBP7.25□□□□□ -1.25
USP6NL-203ENST00000443016 DGCR14Q96DF8 476 aaKnown RBP7.25□□□□□ -1.25
USP6NL-203ENST00000443016 CPNE2Q96FN4 548 aaPredicted RBP7.25□□□□□ -1.25
USP6NL-203ENST00000443016 WDFY2Q96P53 400 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 RBM38Q9H0Z9 239 aaKnown RBP7.25□□□□□ -1.25
USP6NL-203ENST00000443016 EXTL2Q9UBQ6 330 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 V9GYS6 101 aa7.25□□□□□ -1.25
USP6NL-203ENST00000443016 ZNF816-ZNF321PA0A0X1KG74 233 aa7.24□□□□□ -1.25
USP6NL-203ENST00000443016 MDFIC2A0A1B0GVS7 189 aa7.24□□□□□ -1.25
USP6NL-203ENST00000443016 TMEM210A6NLX4 147 aa7.24□□□□□ -1.25
USP6NL-203ENST00000443016 PDCD5O14737 125 aa7.24□□□□□ -1.25
USP6NL-203ENST00000443016 HOXA3O43365 443 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms