RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 SOX6P35712 828 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 LMO4P61968 165 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 LOXL1Q08397 574 aaPredicted RBP11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 EDDM3AQ14507 147 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 MPV17LQ2QL34 196 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 LRRC10Q5BKY1 277 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 NHLRC3Q5JS37 347 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 FOXB2Q5VYV0 432 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 LINC00596Q86U02 117 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 Q8NFD4 153 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 OR5H6Q8NGV6 325 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 DYNC2LI1Q8TCX1 351 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 NEK7Q8TDX7 302 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 H1FXQ92522 213 aaKnown RBP11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 MRPS24Q96EL2 167 aaKnown RBP11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 SDSLQ96GA7 329 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 MED30Q96HR3 178 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 Q96M66 194 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 DNTTIP1Q9H147 329 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 LPAR5Q9H1C0 372 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 ING3Q9NXR8 418 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 NDUFA13Q9P0J0 144 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 ABRACLQ9P1F3 81 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 COMMD3Q9UBI1 195 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 SLC25A10Q9UBX3 287 aaPredicted RBP11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 CLN8Q9UBY8 286 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 MAB21L2Q9Y586 359 aa11.29□□□□□ -0.6
TM9SF4-204ENST00000442842 A0A0A6YYD4 124 aa11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 TMEM82A0PJX8 343 aa11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 FAM157AC9JC47 383 aa11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 TNFRSF13BO14836 293 aaPredicted RBP11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 LDLRAD4O15165 306 aa11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 WNT2P09544 360 aa11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 VEGFCP49767 419 aa11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 LCN2P80188 198 aa11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 ATXN7L3Q14CW9 347 aaPredicted RBP11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 GRK1Q15835 563 aa11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 PAN3Q58A45 887 aaKnown RBP11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 ATPAF1Q5TC12 328 aaPredicted RBP11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 Q6P435 159 aa11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 BRICD5Q6PL45 260 aa11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 BPIFB2Q8N4F0 458 aa11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 ZNF561Q8N587 486 aa11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 AP3S1Q92572 193 aa11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 SSBP3Q9BWW4 388 aaPredicted RBP11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 ATG5Q9H1Y0 275 aa11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 PPA2Q9H2U2 334 aa11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 CCDC59Q9P031 241 aaKnown RBP11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 KAAG1Q9UBP8 84 aa11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 RAB22AQ9UL26 194 aa11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 ETV7Q9Y603 341 aa11.28□□□□□ -0.6
TM9SF4-204ENST00000442842 ZNF701M0R085 212 aaPredicted RBP11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 SLC33A1O00400 549 aaPredicted RBP11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 PSPNO60542 156 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 FCN3O75636 299 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 TK1P04183 234 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 ZNF16P17020 682 aaPredicted RBP11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 ZNF182P17025 639 aaPredicted RBP11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 RAB6AP20340 208 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 OR3A1P47881 315 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 EDDM3BP56851 147 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 TMEM249Q2WGJ8 235 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 WDR25Q64LD2 544 aaPredicted RBP11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 ZNF841Q6ZN19 808 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 RTN4RL2Q86UN3 420 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 SAMD12Q8N8I0 201 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 SUMF2Q8NBJ7 301 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 CHST4Q8NCG5 386 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 OR4S1Q8NGB4 309 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 PPP1R35Q8TAP8 253 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 CYYR1Q96J86 154 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 MRI1Q9BV20 369 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 TM2D1Q9BX74 207 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 RHBDL2Q9NX52 303 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 OTOGQ6ZRI0 2925 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 SPG11Q96JI7 2443 aa11.27□□□□□ -0.61
TM9SF4-204ENST00000442842 TRAV24A0A0B4J272 114 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 SOCS1O15524 211 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 PDCD6O75340 191 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 ZNF737O75373 536 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 IGHV4-31P0DP07 118 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 BLVRBP30043 206 aaPredicted RBP11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 NPY4RP50391 375 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 SCAND1P57086 179 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 MOGAT2Q3SYC2 334 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 RAB12Q6IQ22 244 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 MZT2AQ6P582 158 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 C17orf107Q6ZR85 190 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 GDPD3Q7L5L3 318 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 TPRX1Q8N7U7 411 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 OR4M1Q8NGD0 313 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 OR56B1Q8NGI3 324 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 ACOT12Q8WYK0 555 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 DYRK2Q92630 601 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 KCTD12Q96CX2 325 aaKnown RBP11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 SLC25A38Q96DW6 304 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 COX4I2Q96KJ9 171 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 SNX22Q96L94 193 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 NEDD4LQ96PU5 975 aa11.26□□□□□ -0.61
TM9SF4-204ENST00000442842 DPCDQ9BVM2 203 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms