RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 HIST1H1DP16402 221 aaKnown RBP17.66■□□□□ 0.42
VPS13B-204ENST00000441350 ZNF846Q147U1 533 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 MICBQ29980 383 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 ZNF260Q3ZCT1 412 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 CDNFQ49AH0 187 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 OR5T2Q8NGG2 359 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 ANGPTL6Q8NI99 470 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 CYYR1Q96J86 154 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 PECRQ9BY49 303 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 SRRQ9GZT4 340 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 ZMAT3Q9HA38 289 aaKnown RBP17.66■□□□□ 0.42
VPS13B-204ENST00000441350 OR14J1Q9UGF5 321 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 GLS2Q9UI32 602 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 ZNF222Q9UK12 451 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 PPIAL4EA0A075B759 164 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 TRAV24A0A0B4J272 114 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 PPIAL4DF5H284 164 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 DEGS1O15121 323 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 OR2H2O95918 312 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 MELTFP08582 738 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 GSTP1P09211 210 aaKnown RBP17.65■□□□□ 0.42
VPS13B-204ENST00000441350 PPIAL4FP0DN26 164 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 GNB3P16520 340 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 LMO1P25800 156 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 CEBPDP49716 269 aaPredicted RBP17.65■□□□□ 0.42
VPS13B-204ENST00000441350 SCN1BQ07699 218 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 STUMQ69YW2 141 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 C6orf201Q7Z4U5 140 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 CD177Q8N6Q3 437 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 C15orf40Q8WUR7 153 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 ST8SIA4Q92187 359 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 NEDD4LQ96PU5 975 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 SPACA1Q9HBV2 294 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 PPIAL4AQ9Y536 164 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 TRAV38-1A0A0B4J264 116 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 IGHV4-39P01824 125 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 PTHLHP12272 177 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 PAX1P15863 534 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 PRDX2P32119 198 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 PITPNAQ00169 270 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 NKAPLQ5M9Q1 402 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 SNX29P2Q8IUI4 249 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 DEFB108BQ8NET1 73 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 SDHCQ99643 169 aaPredicted RBP17.65■□□□□ 0.42
VPS13B-204ENST00000441350 PLEKHJ1Q9NW61 149 aa17.65■□□□□ 0.42
VPS13B-204ENST00000441350 SLC33A1O00400 549 aaPredicted RBP17.64■□□□□ 0.41
VPS13B-204ENST00000441350 CTDSPLO15194 276 aa17.64■□□□□ 0.41
VPS13B-204ENST00000441350 TFF1P04155 84 aa17.64■□□□□ 0.41
VPS13B-204ENST00000441350 ZNF44P15621 663 aa17.64■□□□□ 0.41
VPS13B-204ENST00000441350 AMY2BP19961 511 aa17.64■□□□□ 0.41
VPS13B-204ENST00000441350 CD40LGP29965 261 aa17.64■□□□□ 0.41
VPS13B-204ENST00000441350 PPP5CP53041 499 aa17.64■□□□□ 0.41
VPS13B-204ENST00000441350 ARL6IP1Q15041 203 aa17.64■□□□□ 0.41
VPS13B-204ENST00000441350 ZMYND11Q15326 602 aa17.64■□□□□ 0.41
VPS13B-204ENST00000441350 ATAD3CQ5T2N8 411 aa17.64■□□□□ 0.41
VPS13B-204ENST00000441350 OLFML2AQ68BL7 652 aa17.64■□□□□ 0.41
VPS13B-204ENST00000441350 SULT4A1Q9BR01 284 aa17.64■□□□□ 0.41
VPS13B-204ENST00000441350 CHODLQ9H9P2 273 aa17.64■□□□□ 0.41
VPS13B-204ENST00000441350 ELF5Q9UKW6 265 aaPredicted RBP17.64■□□□□ 0.41
VPS13B-204ENST00000441350 TMEM235A6NFC5 223 aa17.63■□□□□ 0.41
VPS13B-204ENST00000441350 TNFRSF13BO14836 293 aaPredicted RBP17.63■□□□□ 0.41
VPS13B-204ENST00000441350 GLAP06280 429 aa17.63■□□□□ 0.41
VPS13B-204ENST00000441350 BTG1P62324 171 aa17.63■□□□□ 0.41
VPS13B-204ENST00000441350 PYDC2Q56P42 97 aa17.63■□□□□ 0.41
VPS13B-204ENST00000441350 BRICD5Q6PL45 260 aa17.63■□□□□ 0.41
VPS13B-204ENST00000441350 GDPD1Q8N9F7 314 aa17.63■□□□□ 0.41
VPS13B-204ENST00000441350 SUMF2Q8NBJ7 301 aa17.63■□□□□ 0.41
VPS13B-204ENST00000441350 GCDHQ92947 438 aaPredicted RBP17.63■□□□□ 0.41
VPS13B-204ENST00000441350 FAAP24Q9BTP7 215 aa17.63■□□□□ 0.41
VPS13B-204ENST00000441350 TMEM165Q9HC07 324 aa17.63■□□□□ 0.41
VPS13B-204ENST00000441350 SERPINE3A8MV23 424 aa17.62■□□□□ 0.41
VPS13B-204ENST00000441350 SIRPB1O00241 398 aa17.62■□□□□ 0.41
VPS13B-204ENST00000441350 TMEM33P57088 247 aa17.62■□□□□ 0.41
VPS13B-204ENST00000441350 PNLIPRP3Q17RR3 467 aa17.62■□□□□ 0.41
VPS13B-204ENST00000441350 ATPAF1Q5TC12 328 aaPredicted RBP17.62■□□□□ 0.41
VPS13B-204ENST00000441350 HACD4Q5VWC8 232 aa17.62■□□□□ 0.41
VPS13B-204ENST00000441350 DNM1P46Q6ZS02 220 aa17.62■□□□□ 0.41
VPS13B-204ENST00000441350 SDSLQ96GA7 329 aa17.62■□□□□ 0.41
VPS13B-204ENST00000441350 DPCDQ9BVM2 203 aaPredicted RBP17.62■□□□□ 0.41
VPS13B-204ENST00000441350 METRNQ9UJH8 293 aa17.62■□□□□ 0.41
VPS13B-204ENST00000441350 APCP25054 2843 aa17.62■□□□□ 0.41
VPS13B-204ENST00000441350 ABCA12Q86UK0 2595 aa17.62■□□□□ 0.41
VPS13B-204ENST00000441350 MEIOCA2RUB1 952 aa17.61■□□□□ 0.41
VPS13B-204ENST00000441350 J3QRK9 145 aa17.61■□□□□ 0.41
VPS13B-204ENST00000441350 CA11O75493 328 aa17.61■□□□□ 0.41
VPS13B-204ENST00000441350 IGHV2-70P01814 119 aa17.61■□□□□ 0.41
VPS13B-204ENST00000441350 GYPAP02724 150 aa17.61■□□□□ 0.41
VPS13B-204ENST00000441350 MRPS10P82664 201 aaKnown RBP17.61■□□□□ 0.41
VPS13B-204ENST00000441350 COL10A1Q03692 680 aa17.61■□□□□ 0.41
VPS13B-204ENST00000441350 ZNF788Q6ZQV5 615 aa17.61■□□□□ 0.41
VPS13B-204ENST00000441350 PEG10Q86TG7 708 aaKnown RBP17.61■□□□□ 0.41
VPS13B-204ENST00000441350 TMEM82A0PJX8 343 aa17.61■□□□□ 0.41
VPS13B-204ENST00000441350 MCRIP1C9JLW8 97 aa17.61■□□□□ 0.41
VPS13B-204ENST00000441350 GSTZ1O43708 216 aaPredicted RBP17.61■□□□□ 0.41
VPS13B-204ENST00000441350 PSPNO60542 156 aa17.61■□□□□ 0.41
VPS13B-204ENST00000441350 ZNF737O75373 536 aa17.61■□□□□ 0.41
VPS13B-204ENST00000441350 PRSS3P35030 304 aa17.61■□□□□ 0.41
VPS13B-204ENST00000441350 GABRA2P47869 451 aa17.61■□□□□ 0.41
VPS13B-204ENST00000441350 PAN3Q58A45 887 aaKnown RBP17.61■□□□□ 0.41
VPS13B-204ENST00000441350 Q8N402 240 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms