RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 CHST6Q9GZX3 395 aa6.25□□□□□ -1.41
VPS50-203ENST00000436177 TMEM133Q9H2Q1 129 aa6.25□□□□□ -1.41
VPS50-203ENST00000436177 SERTAD4Q9NUC0 356 aa6.25□□□□□ -1.41
VPS50-203ENST00000436177 IMPAD1Q9NX62 359 aa6.25□□□□□ -1.41
VPS50-203ENST00000436177 GNG8Q9UK08 70 aa6.25□□□□□ -1.41
VPS50-203ENST00000436177 POMPQ9Y244 141 aa6.25□□□□□ -1.41
VPS50-203ENST00000436177 TRBV2A0A0J9YWF9 115 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 A0A1W2PQL4 384 aaPredicted RBP6.24□□□□□ -1.41
VPS50-203ENST00000436177 TCRBV4S1A1TA0A5B7 111 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 ZAR1LA6NP61 321 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 SIRPB1O00241 398 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 TOR1AO14656 332 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 SH2D1BO14796 132 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 MITFO75030 526 aaPredicted RBP6.24□□□□□ -1.41
VPS50-203ENST00000436177 APOL3O95236 402 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 OR2T7P0C7T2 308 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 FASP25445 335 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 DUSP1P28562 367 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 HTR1FP30939 366 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 MNDAP41218 407 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 DAPP51397 102 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 CDC42P60953 191 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 SLC35A2P78381 396 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 BNIP1Q12981 228 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 RBM39Q14498 530 aaKnown RBP6.24□□□□□ -1.41
VPS50-203ENST00000436177 KPNB1Q14974 876 aaKnown RBP6.24□□□□□ -1.41
VPS50-203ENST00000436177 UBE2V2Q15819 145 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 ATP6AP1Q15904 470 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 TMEM95Q3KNT9 176 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 C9orf152Q5JTZ5 239 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 PRAMEF5Q5TYX0 476 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 AADACL4Q5VUY2 407 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 C12orf73Q69YU5 71 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 CCDC144NLQ6NUI1 221 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 CCDC121Q6ZUS5 278 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 CENPVQ7Z7K6 275 aaPredicted RBP6.24□□□□□ -1.41
VPS50-203ENST00000436177 CATSPERDQ86XM0 798 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 FAM58AQ8N1B3 248 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 DYNAPQ8N1N2 210 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 C11orf42Q8N5U0 333 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 TPRX1Q8N7U7 411 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 DNAAF1Q8NEP3 725 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 PHF21AQ96BD5 680 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 MYCBPQ99417 103 aaPredicted RBP6.24□□□□□ -1.41
VPS50-203ENST00000436177 GPR61Q9BZJ8 451 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 RIBC2Q9H4K1 309 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 LIN7BQ9HAP6 207 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 EXOSC4Q9NPD3 245 aaKnown RBP6.24□□□□□ -1.41
VPS50-203ENST00000436177 RBFOX1Q9NWB1 397 aaKnown RBP6.24□□□□□ -1.41
VPS50-203ENST00000436177 MTCH1Q9NZJ7 389 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 DPM3Q9P2X0 92 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 ZNF281Q9Y2X9 895 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 UBE2J1Q9Y385 318 aaPredicted RBP6.24□□□□□ -1.41
VPS50-203ENST00000436177 ORC6Q9Y5N6 252 aa6.24□□□□□ -1.41
VPS50-203ENST00000436177 NBEAL2Q6ZNJ1 2754 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 TMEM82A0PJX8 343 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 LEUTXA8MZ59 168 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 F8VVB4 439 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 F8VWA3 439 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 M0QZK8 103 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 ZNF44P15621 663 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 BCL3P20749 454 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 CDK2P24941 298 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 PTGFRP43088 359 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 RASSF2P50749 326 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 BLCAPP62952 87 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 ZNF91Q05481 1191 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 SCN1BQ07699 218 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 TMED1Q13445 227 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 TP53I3Q53FA7 332 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 TMEM244Q5VVB8 128 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 C1orf146Q5VVC0 180 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 CCBE1Q6UXH8 406 aaPredicted RBP6.23□□□□□ -1.41
VPS50-203ENST00000436177 LHFPL2Q6ZUX7 228 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 SSX6Q7RTT6 188 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 RTN4RL2Q86UN3 420 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 ABHD12Q8N2K0 398 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 OR4D6Q8NGJ1 314 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 OR8J1Q8NGP2 316 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 OR13C3Q8NGS6 347 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 SPSB1Q96BD6 273 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 CPNE2Q96FN4 548 aaPredicted RBP6.23□□□□□ -1.41
VPS50-203ENST00000436177 OPALINQ96PE5 141 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 CIB1Q99828 191 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 WNT10AQ9GZT5 417 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 AURKAIP1Q9NWT8 199 aaPredicted RBP6.23□□□□□ -1.41
VPS50-203ENST00000436177 GSTK1Q9Y2Q3 226 aa6.23□□□□□ -1.41
VPS50-203ENST00000436177 AMMECR1Q9Y4X0 333 aaPredicted RBP6.23□□□□□ -1.41
VPS50-203ENST00000436177 TSSC4Q9Y5U2 329 aaPredicted RBP6.23□□□□□ -1.41
VPS50-203ENST00000436177 TENM3Q9P273 2699 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 IGKV1-27A0A075B6S5 117 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 DAPL1A0PJW8 107 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 SNTNA6NMZ2 147 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 ENTPD6O75354 484 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 CIB2O75838 187 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 DUS4LO95620 317 aaKnown RBP6.22□□□□□ -1.41
VPS50-203ENST00000436177 MPIG6BO95866 241 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 LPLP06858 475 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 HTR1AP08908 422 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 CALCBP10092 127 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms