RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 IGFL2Q6UWQ7 119 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 ZNF573Q86YE8 665 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 RRNAD1Q96FB5 475 aaKnown RBP14.35□□□□□ -0.11
LIMK1-203ENST00000435201 SYT3Q9BQG1 590 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 SUCNR1Q9BXA5 334 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 DNTTIP1Q9H147 329 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 MTCH1Q9NZJ7 389 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 OR5AC2Q9NZP5 309 aa14.35□□□□□ -0.11
LIMK1-203ENST00000435201 ZNF629Q9UEG4 869 aaPredicted RBP14.35□□□□□ -0.11
LIMK1-203ENST00000435201 FXYD4P59646 89 aa14.34□□□□□ -0.11
LIMK1-203ENST00000435201 TGFBR3Q03167 851 aa14.34□□□□□ -0.11
LIMK1-203ENST00000435201 IAH1Q2TAA2 248 aaPredicted RBP14.34□□□□□ -0.11
LIMK1-203ENST00000435201 IGF2-ASQ6U949 168 aa14.34□□□□□ -0.11
LIMK1-203ENST00000435201 CCDC36Q8IYA8 594 aa14.34□□□□□ -0.11
LIMK1-203ENST00000435201 BATF2Q8N1L9 274 aa14.34□□□□□ -0.11
LIMK1-203ENST00000435201 BVESQ8NE79 360 aa14.34□□□□□ -0.11
LIMK1-203ENST00000435201 FDCSPQ8NFU4 85 aa14.34□□□□□ -0.11
LIMK1-203ENST00000435201 RTN4IP1Q8WWV3 396 aaPredicted RBP14.34□□□□□ -0.11
LIMK1-203ENST00000435201 MICU1Q9BPX6 476 aa14.34□□□□□ -0.11
LIMK1-203ENST00000435201 SHARPINQ9H0F6 387 aa14.34□□□□□ -0.11
LIMK1-203ENST00000435201 PLSCR2Q9NRY7 297 aa14.34□□□□□ -0.11
LIMK1-203ENST00000435201 GSKIPQ9P0R6 139 aa14.34□□□□□ -0.11
LIMK1-203ENST00000435201 CLCF1Q9UBD9 225 aa14.34□□□□□ -0.11
LIMK1-203ENST00000435201 S100A10P60903 97 aa14.33□□□□□ -0.11
LIMK1-203ENST00000435201 GNG3P63215 75 aa14.33□□□□□ -0.11
LIMK1-203ENST00000435201 FAM74A1Q5RGS3 127 aa14.33□□□□□ -0.11
LIMK1-203ENST00000435201 Q6ZPA2 131 aa14.33□□□□□ -0.11
LIMK1-203ENST00000435201 LRTM2Q8N967 370 aa14.33□□□□□ -0.11
LIMK1-203ENST00000435201 CCDC71LQ8N9Z2 235 aa14.33□□□□□ -0.11
LIMK1-203ENST00000435201 BHLHE23Q8NDY6 225 aa14.33□□□□□ -0.11
LIMK1-203ENST00000435201 NARFLQ9H6Q4 476 aa14.33□□□□□ -0.11
LIMK1-203ENST00000435201 SPACA1Q9HBV2 294 aa14.33□□□□□ -0.11
LIMK1-203ENST00000435201 SLC2A9Q9NRM0 540 aa14.33□□□□□ -0.11
LIMK1-203ENST00000435201 TUBD1Q9UJT1 453 aa14.33□□□□□ -0.11
LIMK1-203ENST00000435201 KCNAB3O43448 404 aa14.33□□□□□ -0.12
LIMK1-203ENST00000435201 NAPSAO96009 420 aa14.33□□□□□ -0.12
LIMK1-203ENST00000435201 M6PRP20645 277 aa14.33□□□□□ -0.12
LIMK1-203ENST00000435201 MRPL49Q13405 166 aaKnown RBP14.33□□□□□ -0.12
LIMK1-203ENST00000435201 TMEM187Q14656 261 aa14.33□□□□□ -0.12
LIMK1-203ENST00000435201 SMCO1Q147U7 214 aa14.33□□□□□ -0.12
LIMK1-203ENST00000435201 GGNBP1Q5YKI7 109 aa14.33□□□□□ -0.12
LIMK1-203ENST00000435201 UNQ6126/PRO20091Q6UXV3 157 aa14.33□□□□□ -0.12
LIMK1-203ENST00000435201 RSRP1Q9BUV0 290 aa14.33□□□□□ -0.12
LIMK1-203ENST00000435201 C1QTNF6Q9BXI9 259 aa14.33□□□□□ -0.12
LIMK1-203ENST00000435201 PKIBQ9C010 78 aa14.33□□□□□ -0.12
LIMK1-203ENST00000435201 TRAV17A0A0B4J275 112 aa14.32□□□□□ -0.12
LIMK1-203ENST00000435201 IL24Q13007 206 aa14.32□□□□□ -0.12
LIMK1-203ENST00000435201 HAGHLQ6PII5 290 aaPredicted RBP14.32□□□□□ -0.12
LIMK1-203ENST00000435201 BAP18Q8IXM2 172 aa14.32□□□□□ -0.12
LIMK1-203ENST00000435201 LINC00052Q96N35 136 aa14.32□□□□□ -0.12
LIMK1-203ENST00000435201 CNTNAP3BQ96NU0 1288 aa14.32□□□□□ -0.12
LIMK1-203ENST00000435201 CNTNAP3Q9BZ76 1288 aa14.32□□□□□ -0.12
LIMK1-203ENST00000435201 BARX1Q9HBU1 254 aaPredicted RBP14.32□□□□□ -0.12
LIMK1-203ENST00000435201 Q9N2K0 584 aa14.32□□□□□ -0.12
LIMK1-203ENST00000435201 CYTL1Q9NRR1 136 aa14.32□□□□□ -0.12
LIMK1-203ENST00000435201 CACNA1HO95180 2353 aa14.32□□□□□ -0.12
LIMK1-203ENST00000435201 SYNGR1O43759 233 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 PPYP01298 95 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 OR5AC1P0C628 307 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 ZNF14P17017 642 aaPredicted RBP14.31□□□□□ -0.12
LIMK1-203ENST00000435201 AADACP22760 399 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 UBE2NP61088 152 aaKnown RBP14.31□□□□□ -0.12
LIMK1-203ENST00000435201 SRSF6Q13247 344 aaKnown RBP14.31□□□□□ -0.12
LIMK1-203ENST00000435201 IL13RA2Q14627 380 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 LIAT1Q6ZQX7 453 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 FAM185AQ8N0U4 392 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 SUN5Q8TC36 379 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 GTF3AQ92664 365 aaKnown RBP14.31□□□□□ -0.12
LIMK1-203ENST00000435201 MRPL24Q96A35 216 aaKnown RBP14.31□□□□□ -0.12
LIMK1-203ENST00000435201 RIMS4Q9H426 269 aaPredicted RBP14.31□□□□□ -0.12
LIMK1-203ENST00000435201 RHOFQ9HBH0 211 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 LHX6Q9UPM6 363 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 MED12LQ86YW9 2145 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 KIR2DS1A0A191URI9 304 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 MSGN1A6NI15 193 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 AQP7O14520 342 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 TAAR5O14804 337 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 ZNF205O95201 554 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 DIRAS3O95661 229 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 PRKACAP17612 351 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 KIR2DS4P43632 304 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 KIR2DS1Q14954 304 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 PHLDA2Q53GA4 152 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 OR2T2Q6IF00 324 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 FBXW12Q6X9E4 464 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 FAM214BQ7L5A3 538 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 OR5T2Q8NGG2 359 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 OR51B6Q9H340 312 aa14.31□□□□□ -0.12
LIMK1-203ENST00000435201 OTOGLQ3ZCN5 2332 aa14.3□□□□□ -0.12
LIMK1-203ENST00000435201 LILRA1O75019 489 aa14.3□□□□□ -0.12
LIMK1-203ENST00000435201 CNOT4O95628 575 aaKnown RBP14.3□□□□□ -0.12
LIMK1-203ENST00000435201 TK1P04183 234 aa14.3□□□□□ -0.12
LIMK1-203ENST00000435201 GLAP06280 429 aa14.3□□□□□ -0.12
LIMK1-203ENST00000435201 IGHV1-2P23083 117 aa14.3□□□□□ -0.12
LIMK1-203ENST00000435201 EIF5AP63241 154 aaKnown RBP14.3□□□□□ -0.12
LIMK1-203ENST00000435201 LGI3Q8N145 548 aa14.3□□□□□ -0.12
LIMK1-203ENST00000435201 NEK7Q8TDX7 302 aa14.3□□□□□ -0.12
LIMK1-203ENST00000435201 CCDC120Q96HB5 630 aa14.3□□□□□ -0.12
LIMK1-203ENST00000435201 HS3ST6Q96QI5 342 aa14.3□□□□□ -0.12
LIMK1-203ENST00000435201 TRIB1Q96RU8 372 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms