RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 PDCD6O75340 191 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 NXPH2O95156 264 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 PTTG1O95997 202 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 CHATP28329 748 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 GATA4P43694 442 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 SNU13P55769 128 aaKnown RBP9.51□□□□□ -0.89
LINC00539-203ENST00000434601 GNG2P59768 71 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 ACTBP60709 375 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 ERVK11-1P61568 191 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 ACTG1P63261 375 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 SSBP1Q04837 148 aaKnown RBP9.51□□□□□ -0.89
LINC00539-203ENST00000434601 KLF9Q13886 244 aaPredicted RBP9.51□□□□□ -0.89
LINC00539-203ENST00000434601 MPPED2Q15777 294 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 SIGIRRQ6IA17 410 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 FIP1L1Q6UN15 594 aaKnown RBP9.51□□□□□ -0.89
LINC00539-203ENST00000434601 WDR82Q6UXN9 313 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 C20orf204Q6ZNR8 217 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 Q71RC1 249 aaPredicted RBP9.51□□□□□ -0.89
LINC00539-203ENST00000434601 KRTAP1-3Q8IUG1 177 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 TOMM5Q8N4H5 51 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 MINDY2Q8NBR6 621 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 OR10Z1Q8NGY1 313 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 LILRB1Q8NHL6 650 aaPredicted RBP9.51□□□□□ -0.89
LINC00539-203ENST00000434601 CHPT1Q8WUD6 406 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 NUDCD2Q8WVJ2 157 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 ITLN1Q8WWA0 313 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 ST8SIA4Q92187 359 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 SEH1LQ96EE3 360 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 CCL19Q99731 98 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 FN3KRPQ9HA64 309 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 DYNLRB1Q9NP97 96 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 C1orf123Q9NWV4 160 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 CISD1Q9NZ45 108 aaKnown RBP9.51□□□□□ -0.89
LINC00539-203ENST00000434601 IL36RNQ9UBH0 155 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 MTFP1Q9UDX5 166 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 IL19Q9UHD0 177 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 ELF5Q9UKW6 265 aaPredicted RBP9.51□□□□□ -0.89
LINC00539-203ENST00000434601 HSF4Q9ULV5 492 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 KCNK7Q9Y2U2 307 aa9.51□□□□□ -0.89
LINC00539-203ENST00000434601 RAI1Q7Z5J4 1906 aaPredicted RBP9.5□□□□□ -0.89
LINC00539-203ENST00000434601 MEIS3P1A6NDR6 274 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 SERPINE3A8MV23 424 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 PLA2G10O15496 165 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 ORC5O43913 435 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 CA11O75493 328 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 RBBP9O75884 186 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 OR7C1O76099 320 aaPredicted RBP9.5□□□□□ -0.89
LINC00539-203ENST00000434601 ECDO95905 644 aaPredicted RBP9.5□□□□□ -0.89
LINC00539-203ENST00000434601 CD55P08174 381 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 GSTT2BP0CG30 244 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 AP3S2P59780 193 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 IKZF1Q13422 519 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 TRIM16LQ309B1 348 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 SPRNQ5BIV9 151 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 FAM209AQ5JX71 171 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 OLFML2AQ68BL7 652 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 ZNF826PQ6ZT77 177 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 C6orf201Q7Z4U5 140 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 TRAPPC6BQ86SZ2 158 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 MOGAT3Q86VF5 341 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 COX4I2Q96KJ9 171 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 NEDD4LQ96PU5 975 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 C11orf54Q9H0W9 315 aaPredicted RBP9.5□□□□□ -0.89
LINC00539-203ENST00000434601 HES4Q9HCC6 221 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 PLEKHJ1Q9NW61 149 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 TAS2R8Q9NYW2 309 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 ZNF581Q9P0T4 197 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 RCC2Q9P258 522 aaKnown RBP9.5□□□□□ -0.89
LINC00539-203ENST00000434601 KLK11Q9UBX7 282 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 CACNG2Q9Y698 323 aa9.5□□□□□ -0.89
LINC00539-203ENST00000434601 ANKRD20A5PA0PJZ0 165 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 H3BUI4 141 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 LYRM1O43325 122 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 SSX5O60225 188 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 LY6G6DO95868 133 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 CSF1P09603 554 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 TNFRSF1AP19438 455 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 GLRA1P23415 457 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 RCVRNP35243 200 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 SNRPD2P62316 118 aaKnown RBP9.49□□□□□ -0.89
LINC00539-203ENST00000434601 DYRK1AQ13627 763 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 ARFRP1Q13795 201 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 OXA1LQ15070 435 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 MST1LQ2TV78 715 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 PCGF3Q3KNV8 242 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 SPIN3Q5JUX0 258 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 MZT2BQ6NZ67 158 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 CENPSQ8N2Z9 138 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 MUC15Q8N387 334 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 LRRC29Q8WV35 223 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 FBXW5Q969U6 566 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 ERGIC1Q969X5 290 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 CYYR1Q96J86 154 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 Q96MF0 132 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 C7orf50Q9BRJ6 194 aaKnown RBP9.49□□□□□ -0.89
LINC00539-203ENST00000434601 OCEL1Q9H607 264 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 IFT22Q9H7X7 185 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 UBTD1Q9HAC8 227 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 SPACA1Q9HBV2 294 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 IFT46Q9NQC8 304 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms