RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 RNPS1Q15287 305 aaKnown RBP6.42□□□□□ -1.38
COL17A1-204ENST00000433822 RSU1Q15404 277 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 ABHD17BQ5VST6 288 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 TFAP2EQ6VUC0 442 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 TMPRSS7Q7RTY8 843 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 TIPARPQ7Z3E1 657 aaKnown RBP6.42□□□□□ -1.38
COL17A1-204ENST00000433822 RNF144BQ7Z419 303 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 YRDCQ86U90 279 aaKnown RBP6.42□□□□□ -1.38
COL17A1-204ENST00000433822 SGPP2Q8IWX5 399 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 BAP18Q8IXM2 172 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 FAM185AQ8N0U4 392 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 LRRC18Q8N456 261 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 OR2M7Q8NG81 312 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 OR10K1Q8NGX5 313 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 RNF141Q8WVD5 230 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 SAT2Q96F10 170 aaPredicted RBP6.42□□□□□ -1.38
COL17A1-204ENST00000433822 ABHD14BQ96IU4 210 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 CXorf58Q96LI9 332 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 ZNF471Q9BX82 626 aaPredicted RBP6.42□□□□□ -1.38
COL17A1-204ENST00000433822 WDR13Q9H1Z4 485 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 ZNF286AQ9HBT8 521 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 ACKR4Q9NPB9 350 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 DEPPQ9NTK1 212 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 LRFN1Q9P244 771 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 ZNF230Q9UIE0 474 aaPredicted RBP6.42□□□□□ -1.38
COL17A1-204ENST00000433822 MCTS1Q9ULC4 181 aaKnown RBP6.42□□□□□ -1.38
COL17A1-204ENST00000433822 CSAG2Q9Y5P2 127 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 DOCK10Q96BY6 2186 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 ABCA12Q86UK0 2595 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 COL6A6A6NMZ7 2263 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 A0A0G2JMM0 328 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 A0A1W2PPB8 328 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 DUXBA0A1W2PPF3 345 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 A0A1W2PRS3 328 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 KIR3DP1A8MWS1 328 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 F5H0A9 414 aaPredicted RBP6.41□□□□□ -1.38
COL17A1-204ENST00000433822 CCSO14618 274 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 C1QL1O75973 258 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 NEURL1O76050 574 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 SYNGR4O95473 234 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 IFNA21P01568 189 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 LCATP04180 440 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 FCGR3AP08637 254 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 CTXN2P0C2S0 81 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 RFPL3SP0C7P2 107 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 JMJD7P0C870 316 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 TMEM225BP0DP42 221 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 CD82P27701 267 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 ARR3P36575 388 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 NPY4RP50391 375 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 NOVA1P51513 510 aaKnown RBP6.41□□□□□ -1.38
COL17A1-204ENST00000433822 CLDN18P56856 261 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 RBM11P57052 281 aaKnown RBP6.41□□□□□ -1.38
COL17A1-204ENST00000433822 RND3P61587 244 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 SRPXP78539 464 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 HGFACQ04756 655 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 MPV17LQ2QL34 196 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 WIPI1Q5MNZ9 446 aaPredicted RBP6.41□□□□□ -1.38
COL17A1-204ENST00000433822 ZNF774Q6NX45 483 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 IL34Q6ZMJ4 242 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 KCTD9Q7L273 389 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 OSR2Q8N2R0 312 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 CCDC71LQ8N9Z2 235 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 LHFPL5Q8TAF8 219 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 CASTOR1Q8WTX7 329 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 MARC2Q969Z3 335 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 APOBEC3DQ96AK3 386 aaPredicted RBP6.41□□□□□ -1.38
COL17A1-204ENST00000433822 SEC22AQ96IW7 307 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 FER1L6-AS2Q96M78 137 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 ALKBH3Q96Q83 286 aaPredicted RBP6.41□□□□□ -1.38
COL17A1-204ENST00000433822 CMSS1Q9BQ75 279 aaKnown RBP6.41□□□□□ -1.38
COL17A1-204ENST00000433822 SYT3Q9BQG1 590 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 ST6GALNAC5Q9BVH7 336 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 RIMS4Q9H426 269 aaPredicted RBP6.41□□□□□ -1.38
COL17A1-204ENST00000433822 PLK3Q9H4B4 646 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 PLEKHA2Q9HB19 425 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 C12orf4Q9NQ89 552 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 GPR173Q9NS66 373 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 RCC2Q9P258 522 aaKnown RBP6.41□□□□□ -1.38
COL17A1-204ENST00000433822 KCNIP3Q9Y2W7 256 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 KLF13Q9Y2Y9 288 aaPredicted RBP6.41□□□□□ -1.38
COL17A1-204ENST00000433822 NOSIPQ9Y314 301 aaKnown RBP6.41□□□□□ -1.38
COL17A1-204ENST00000433822 POMT1Q9Y6A1 747 aa6.41□□□□□ -1.38
COL17A1-204ENST00000433822 NCKAP5O14513 1909 aa6.4□□□□□ -1.38
COL17A1-204ENST00000433822 PTPRBP23467 1997 aa6.4□□□□□ -1.38
COL17A1-204ENST00000433822 ATMQ13315 3056 aa6.4□□□□□ -1.38
COL17A1-204ENST00000433822 SDK2Q58EX2 2172 aa6.4□□□□□ -1.38
COL17A1-204ENST00000433822 MED12Q93074 2177 aa6.4□□□□□ -1.38
COL17A1-204ENST00000433822 IGKV1-27A0A075B6S5 117 aa6.4□□□□□ -1.38
COL17A1-204ENST00000433822 TRBV6-6A0A0A6YYG2 114 aa6.4□□□□□ -1.38
COL17A1-204ENST00000433822 PQLC2LA1A4F0 135 aa6.4□□□□□ -1.38
COL17A1-204ENST00000433822 MPTX1A8MV57 137 aa6.4□□□□□ -1.38
COL17A1-204ENST00000433822 EEF1E1-BLOC1S5C9J1V9 151 aa6.4□□□□□ -1.38
COL17A1-204ENST00000433822 ZNF587BE7ETH6 402 aa6.4□□□□□ -1.38
COL17A1-204ENST00000433822 H0YIZ8 118 aa6.4□□□□□ -1.38
COL17A1-204ENST00000433822 MRPL33O75394 65 aaKnown RBP6.4□□□□□ -1.38
COL17A1-204ENST00000433822 HTR3BO95264 441 aa6.4□□□□□ -1.38
COL17A1-204ENST00000433822 OR5H8P0DN80 308 aa6.4□□□□□ -1.38
COL17A1-204ENST00000433822 CD79AP11912 226 aa6.4□□□□□ -1.38
COL17A1-204ENST00000433822 PGAM2P15259 253 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms