RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 GNG7O60262 68 aa7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 SAP30O75446 220 aa7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 CLDN15P56746 228 aa7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 TRA2BP62995 288 aaKnown RBP7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 CSNK1G2P78368 415 aa7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 ARG2P78540 354 aa7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 SMAD3P84022 425 aaKnown RBP7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 MFGE8Q08431 387 aaPredicted RBP7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 MSMO1Q15800 293 aa7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 C1orf100Q5SVJ3 147 aa7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 RAET1LQ5VY80 246 aa7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 CHST4Q8NCG5 386 aa7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 OR51A4Q8NGJ6 313 aa7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 OR5AR1Q8NGP9 310 aa7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 SCARF2Q96GP6 870 aaPredicted RBP7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 TNFRSF13CQ96RJ3 184 aa7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 ZFYVE21Q9BQ24 234 aa7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 OR51I2Q9H344 312 aa7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 CGGBP1Q9UFW8 167 aaPredicted RBP7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 ZNF443Q9Y2A4 671 aaPredicted RBP7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 OR51B2Q9Y5P1 312 aa7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 TRAPPC1Q9Y5R8 145 aa7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 PDE4DIPQ5VU43 2346 aa7.75□□□□□ -1.17
CDC42BPA-206ENST00000429440 TAX1BP3O14907 124 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 OR10J4P0C629 311 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 NPPBP16860 134 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 FSTP19883 344 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 CEBPDP49716 269 aaPredicted RBP7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 TXNDC8Q6A555 127 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 FBXL14Q8N1E6 418 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 DCAF4L2Q8NA75 395 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 PLPP7Q8NBV4 271 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 TSEN15Q8WW01 171 aaKnown RBP7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 ZNRF4Q8WWF5 429 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 FAM46BQ96A09 425 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 LMLNQ96KR4 655 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 ADOQ96SZ5 270 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 SSBP4Q9BWG4 385 aaPredicted RBP7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 RAB11FIP5Q9BXF6 653 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 MTHFD2LQ9H903 347 aaPredicted RBP7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 CALHM2Q9HA72 323 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 PGPEP1Q9NXJ5 209 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 EHFQ9NZC4 300 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 ABI3Q9P2A4 366 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 CKLFQ9UBR5 152 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 PLXND1Q9Y4D7 1925 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 PLPP1O14494 284 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 CLDN7O95471 211 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 PTNP21246 168 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 CTSSP25774 331 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 CCKBRP32239 447 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 BSGP35613 385 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 SLC6A8P48029 635 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 RAB9AP51151 201 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 RHOAP61586 193 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 FHL1Q13642 323 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 ADIRFQ15847 76 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 LINC01590Q5TEZ4 76 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 ASPHD2Q6ICH7 369 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 LCN10Q6JVE6 187 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 SLC39A11Q8N1S5 342 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 MTURNQ8N3F0 131 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 OR4F17Q8NGA8 305 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 OR6K6Q8NGW6 343 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 TIFAQ96CG3 184 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 C4orf45Q96LM5 186 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 OR4F4Q96R69 305 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 CCDC3Q9BQI4 270 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 REPIN1Q9BWE0 567 aaKnown RBP7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 C5AR2Q9P296 337 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 KCNE3Q9Y6H6 103 aa7.74□□□□□ -1.17
CDC42BPA-206ENST00000429440 PRRC2BQ5JSZ5 2229 aaKnown RBP7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 ARID1AO14497 2285 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 PTPRSQ13332 1948 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 GDF9O60383 454 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 NPIPB7O75200 414 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 NDUFB2O95178 105 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 ADH1BP00325 375 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 IGFBP3P17936 291 aaPredicted RBP7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 MNX1P50219 401 aaPredicted RBP7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 LCN6P62502 163 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 DMWDQ09019 674 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 OR1Q1Q15612 314 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 AMMECR1LQ6DCA0 310 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 UBALD2Q8IYN6 164 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 C17orf78Q8N4C9 275 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 ZIC4Q8N9L1 334 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 NECAP1Q8NC96 275 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 ZNF689Q96CS4 500 aaPredicted RBP7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 POM121L2Q96KW2 1035 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 PARLQ9H300 379 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 MMP17Q9ULZ9 603 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 B3GALT5Q9Y2C3 310 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 INSL5Q9Y5Q6 135 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 NPIPA5A0A0B4J1W7 369 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 G3V3Y1 287 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 ARPC3O15145 178 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 PITX3O75364 302 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 MPZL1O95297 269 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms