RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 GRHPRQ9UBQ7 328 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 LIPGQ9Y5X9 500 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 EDDM13A0A1B0GTR0 161 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 A0A1W2PP11 408 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 PITX3O75364 302 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 LINC00271P0C7V0 271 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 IRF2P14316 349 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 P2RY2P41231 377 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 C2orf27AQ580R0 203 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 TMEM31Q5JXX7 168 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 LCN10Q6JVE6 187 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 ORAOV1Q8WV07 137 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 SPACA7Q96KW9 195 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 KCNK17Q96T54 332 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 K7EP13 123 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 ZNF25P17030 456 aaPredicted RBP4.47□□□□□ -1.69
RIF1-203ENST00000428287 TCN2P20062 427 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 DCAF7P61962 342 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 SELENOTP62341 195 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 EXOSC7Q15024 291 aaKnown RBP4.47□□□□□ -1.69
RIF1-203ENST00000428287 EXT1Q16394 746 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 DNM1P34Q6PK57 102 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 THNSL2Q86YJ6 484 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 TMEM56Q96MV1 263 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 TMEM56-RWDD3S4R434 201 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 SPACA6W5XKT8 324 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 DUXBA0A1W2PPF3 345 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 B3GALT2O43825 422 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 BCL2P10415 239 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 KLK2P20151 261 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 RBMXP38159 391 aaKnown RBP4.47□□□□□ -1.69
RIF1-203ENST00000428287 UBE2NP61088 152 aaKnown RBP4.47□□□□□ -1.69
RIF1-203ENST00000428287 SRPXP78539 464 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 TLE4Q04727 773 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 PLXDC2Q6UX71 529 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 GRINAQ7Z429 371 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 FOXRED2Q8IWF2 684 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 PLPPR1Q8TBJ4 325 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 PLK3Q9H4B4 646 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 PRM3Q9NNZ6 103 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 LIPT2A6NK58 231 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 KNG1P01042 644 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 PRH1P02810 166 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 DUSP1P28562 367 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 CTGFP29279 349 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 WASP42768 502 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 MPV17LQ2QL34 196 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 TRIM61Q5EBN2 209 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 ALKBH2Q6NS38 261 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 OR2V1Q8NHB1 315 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 RTN4IP1Q8WWV3 396 aaPredicted RBP4.47□□□□□ -1.69
RIF1-203ENST00000428287 NAA60Q9H7X0 242 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 MCTS1Q9ULC4 181 aaKnown RBP4.47□□□□□ -1.69
RIF1-203ENST00000428287 MRPS23Q9Y3D9 190 aaKnown RBP4.47□□□□□ -1.69
RIF1-203ENST00000428287 HEBP2Q9Y5Z4 205 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 LOC102725191A0A1B0GVB3 256 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 H0YGG7 62 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 HSPA12AO43301 675 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 SLC16A7O60669 478 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 ARF3P61204 181 aaPredicted RBP4.47□□□□□ -1.69
RIF1-203ENST00000428287 CCL7P80098 99 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 FOXL1Q12952 345 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 TMEM187Q14656 261 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 TPTE2P1Q5T6R2 138 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 LINC01551Q86U37 167 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 CHST4Q8NCG5 386 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 ADPRHL1Q8NDY3 354 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 OR14L1PQ8NHC6 308 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 SLC46A1Q96NT5 459 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 KLHDC3Q9BQ90 382 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 PHPT1Q9NRX4 125 aaPredicted RBP4.47□□□□□ -1.69
RIF1-203ENST00000428287 ABCA12Q86UK0 2595 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 IGKV1D-8A0A087WSZ0 117 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 LNP1A1A4G5 178 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 TGFBR3LH3BV60 316 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 XKRYO14609 159 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 LATO43561 262 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 VENTXO95231 258 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 C8AP07357 584 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 OR13C7P0DN81 318 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 NR2C1P13056 603 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 CTRLP40313 264 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 PIGPP57054 158 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 OR2G3Q8NGZ4 309 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 DAZLQ92904 295 aaKnown RBP4.47□□□□□ -1.69
RIF1-203ENST00000428287 RARRES2Q99969 163 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 ATG101Q9BSB4 218 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 NICN1Q9BSH3 213 aa4.47□□□□□ -1.69
RIF1-203ENST00000428287 PARP12Q9H0J9 701 aaKnown RBP4.47□□□□□ -1.69
RIF1-203ENST00000428287 LYRM2Q9NU23 88 aaPredicted RBP4.47□□□□□ -1.69
RIF1-203ENST00000428287 SDCBPO00560 298 aaPredicted RBP4.46□□□□□ -1.69
RIF1-203ENST00000428287 RAD51DO75771 328 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 TOMM40O96008 361 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 CHATP28329 748 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 HSD17B7P56937 341 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 ARFRP1Q13795 201 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 PRTGQ2VWP7 1150 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 ASCL4Q6XD76 172 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 ZNF100Q8IYN0 542 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 IFI44Q8TCB0 444 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms