RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TBL2Q9Y4P3 447 aaKnown RBP14.89□□□□□ -0.03
PSPC1-202ENST00000427943 MEGF11A6BM72 1044 aa14.88□□□□□ -0.03
PSPC1-202ENST00000427943 TMEM212A6NML5 194 aa14.88□□□□□ -0.03
PSPC1-202ENST00000427943 MGST3O14880 152 aa14.88□□□□□ -0.03
PSPC1-202ENST00000427943 KDM4BO94953 1096 aa14.88□□□□□ -0.03
PSPC1-202ENST00000427943 MT-ND2P03891 347 aa14.88□□□□□ -0.03
PSPC1-202ENST00000427943 GBX2P52951 348 aaPredicted RBP14.88□□□□□ -0.03
PSPC1-202ENST00000427943 P2RX3P56373 397 aa14.88□□□□□ -0.03
PSPC1-202ENST00000427943 SSX2Q16385 188 aa14.88□□□□□ -0.03
PSPC1-202ENST00000427943 HIST2H2BDQ6DRA6 164 aa14.88□□□□□ -0.03
PSPC1-202ENST00000427943 OR11H6Q8NGC7 330 aa14.88□□□□□ -0.03
PSPC1-202ENST00000427943 OR5AK2Q8NH90 309 aa14.88□□□□□ -0.03
PSPC1-202ENST00000427943 FOXRED1Q96CU9 486 aaPredicted RBP14.88□□□□□ -0.03
PSPC1-202ENST00000427943 RAB18Q9NP72 206 aa14.88□□□□□ -0.03
PSPC1-202ENST00000427943 SMPD3Q9NY59 655 aaPredicted RBP14.88□□□□□ -0.03
PSPC1-202ENST00000427943 FBLN5Q9UBX5 448 aa14.88□□□□□ -0.03
PSPC1-202ENST00000427943 DHDHQ9UQ10 334 aa14.88□□□□□ -0.03
PSPC1-202ENST00000427943 RPL36Q9Y3U8 105 aaKnown RBP14.88□□□□□ -0.03
PSPC1-202ENST00000427943 SESN1Q9Y6P5 492 aa14.88□□□□□ -0.03
PSPC1-202ENST00000427943 IGHV2-26A0A0B4J1V2 119 aa14.87□□□□□ -0.03
PSPC1-202ENST00000427943 SH2D1BO14796 132 aa14.87□□□□□ -0.03
PSPC1-202ENST00000427943 SULT1B1O43704 296 aa14.87□□□□□ -0.03
PSPC1-202ENST00000427943 MMP23AO75900 390 aa14.87□□□□□ -0.03
PSPC1-202ENST00000427943 CCDC159P0C7I6 412 aa14.87□□□□□ -0.03
PSPC1-202ENST00000427943 LIMS3P0CW19 117 aa14.87□□□□□ -0.03
PSPC1-202ENST00000427943 LIMS4P0CW20 117 aa14.87□□□□□ -0.03
PSPC1-202ENST00000427943 ZNF44P15621 663 aa14.87□□□□□ -0.03
PSPC1-202ENST00000427943 JUNBP17275 347 aaPredicted RBP14.87□□□□□ -0.03
PSPC1-202ENST00000427943 GTF2A1P52655 376 aaPredicted RBP14.87□□□□□ -0.03
PSPC1-202ENST00000427943 EFNB2P52799 333 aa14.87□□□□□ -0.03
PSPC1-202ENST00000427943 DEFA6Q01524 100 aa14.87□□□□□ -0.03
PSPC1-202ENST00000427943 SCN1BQ07699 218 aa14.87□□□□□ -0.03
PSPC1-202ENST00000427943 IL18R1Q13478 541 aa14.87□□□□□ -0.03
PSPC1-202ENST00000427943 ZSCAN26Q16670 478 aa14.87□□□□□ -0.03
PSPC1-202ENST00000427943 TMEM219Q86XT9 240 aa14.87□□□□□ -0.03
PSPC1-202ENST00000427943 ZNF555Q8NEP9 628 aa14.87□□□□□ -0.03
PSPC1-202ENST00000427943 MMP27Q9H306 513 aa14.87□□□□□ -0.03
PSPC1-202ENST00000427943 ING3Q9NXR8 418 aa14.87□□□□□ -0.03
PSPC1-202ENST00000427943 TCF19Q9Y242 345 aa14.87□□□□□ -0.03
PSPC1-202ENST00000427943 VGLL3A8MV65 326 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 WBP4O75554 376 aaKnown RBP14.86□□□□□ -0.03
PSPC1-202ENST00000427943 CLIC3O95833 236 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 TMEM225BP0DP42 221 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 SOX2P48431 317 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 ZP1P60852 638 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 MRPL28Q13084 256 aaKnown RBP14.86□□□□□ -0.03
PSPC1-202ENST00000427943 KISS1Q15726 138 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 KLHL22Q53GT1 634 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 PRAMEF5Q5TYX0 476 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 CCBE1Q6UXH8 406 aaPredicted RBP14.86□□□□□ -0.03
PSPC1-202ENST00000427943 BAIAP2L2Q6UXY1 529 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 LIAT1Q6ZQX7 453 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 SERPINA12Q8IW75 414 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 PARP16Q8N5Y8 322 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 OR2T6Q8NHC8 308 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 RPS4Y2Q8TD47 263 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 RGP1Q92546 391 aaPredicted RBP14.86□□□□□ -0.03
PSPC1-202ENST00000427943 STMN2Q93045 179 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 MALSU1Q96EH3 234 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 NPFFR1Q9GZQ6 430 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 TMEM133Q9H2Q1 129 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 RANBP3Q9H6Z4 567 aaPredicted RBP14.86□□□□□ -0.03
PSPC1-202ENST00000427943 ABCB10Q9NRK6 738 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 MRPS18AQ9NVS2 196 aaKnown RBP14.86□□□□□ -0.03
PSPC1-202ENST00000427943 FOXJ3Q9UPW0 622 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 PCDHGB5Q9Y5G0 923 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 HILPDAQ9Y5L2 63 aa14.86□□□□□ -0.03
PSPC1-202ENST00000427943 FAM172BPA6NC97 362 aa14.85□□□□□ -0.03
PSPC1-202ENST00000427943 ERP29P30040 261 aaKnown RBP14.85□□□□□ -0.03
PSPC1-202ENST00000427943 KIR2DS4P43632 304 aa14.85□□□□□ -0.03
PSPC1-202ENST00000427943 GLIPR1P48060 266 aa14.85□□□□□ -0.03
PSPC1-202ENST00000427943 AESQ08117 197 aa14.85□□□□□ -0.03
PSPC1-202ENST00000427943 LRRC36Q1X8D7 754 aa14.85□□□□□ -0.03
PSPC1-202ENST00000427943 ZNF691Q5VV52 312 aa14.85□□□□□ -0.03
PSPC1-202ENST00000427943 XAF1Q6GPH4 301 aa14.85□□□□□ -0.03
PSPC1-202ENST00000427943 SAXO1Q8IYX7 474 aa14.85□□□□□ -0.03
PSPC1-202ENST00000427943 KLHDC1Q8N7A1 406 aa14.85□□□□□ -0.03
PSPC1-202ENST00000427943 C11orf44Q8N8P7 122 aa14.85□□□□□ -0.03
PSPC1-202ENST00000427943 OR5D14Q8NGL3 314 aa14.85□□□□□ -0.03
PSPC1-202ENST00000427943 NDNFQ8TB73 568 aa14.85□□□□□ -0.03
PSPC1-202ENST00000427943 CNIH3Q8TBE1 160 aa14.85□□□□□ -0.03
PSPC1-202ENST00000427943 FGF20Q9NP95 211 aaPredicted RBP14.85□□□□□ -0.03
PSPC1-202ENST00000427943 UBE2J1Q9Y385 318 aaPredicted RBP14.85□□□□□ -0.03
PSPC1-202ENST00000427943 TRGV10A0A0A0MS01 117 aa14.84□□□□□ -0.03
PSPC1-202ENST00000427943 ETV1P50549 477 aa14.84□□□□□ -0.03
PSPC1-202ENST00000427943 HABP2Q14520 560 aaPredicted RBP14.84□□□□□ -0.03
PSPC1-202ENST00000427943 ATXN7L3Q14CW9 347 aaPredicted RBP14.84□□□□□ -0.03
PSPC1-202ENST00000427943 HERPUD1Q15011 391 aa14.84□□□□□ -0.03
PSPC1-202ENST00000427943 C2orf68Q2NKX9 166 aa14.84□□□□□ -0.03
PSPC1-202ENST00000427943 OR2G6Q5TZ20 316 aa14.84□□□□□ -0.03
PSPC1-202ENST00000427943 Q6P435 159 aa14.84□□□□□ -0.03
PSPC1-202ENST00000427943 OR51A2Q8NGJ7 313 aa14.84□□□□□ -0.03
PSPC1-202ENST00000427943 FAM110DQ8TAY7 271 aaPredicted RBP14.84□□□□□ -0.03
PSPC1-202ENST00000427943 RDH12Q96NR8 316 aa14.84□□□□□ -0.03
PSPC1-202ENST00000427943 CLEC7AQ9BXN2 247 aa14.84□□□□□ -0.03
PSPC1-202ENST00000427943 TAS2R4Q9NYW5 299 aa14.84□□□□□ -0.03
PSPC1-202ENST00000427943 A0A0G2JK05 382 aa14.83□□□□□ -0.04
PSPC1-202ENST00000427943 A6NDX4 124 aa14.83□□□□□ -0.04
PSPC1-202ENST00000427943 F2RL2O00254 374 aa14.83□□□□□ -0.04
PSPC1-202ENST00000427943 SLC33A1O00400 549 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms