RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 DHRS9Q9BPW9 319 aa6.97□□□□□ -1.29
CTNND1-207ENST00000426142 CTDSP1Q9GZU7 261 aa6.97□□□□□ -1.29
CTNND1-207ENST00000426142 POMT1Q9Y6A1 747 aa6.97□□□□□ -1.29
CTNND1-207ENST00000426142 MAP1BP46821 2468 aaKnown RBP6.97□□□□□ -1.29
CTNND1-207ENST00000426142 RFPL4AA6NLU0 287 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 RFPL4AL1F8VTS6 287 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 IGHA1P01876 353 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 FGF2P09038 288 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 ERVFC1-1P60608 527 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 LSM6P62312 80 aaKnown RBP6.96□□□□□ -1.29
CTNND1-207ENST00000426142 FABP9Q0Z7S8 132 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 ENDOGQ14249 297 aaKnown RBP6.96□□□□□ -1.29
CTNND1-207ENST00000426142 ZNF528Q3MIS6 628 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 TMEM65Q6PI78 240 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 TMEM147Q9BVK8 224 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 DPH3P1Q9H4G8 78 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 SLC25A22Q9H936 323 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 TMEM74BQ9NUR3 256 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 RASL12Q9NYN1 266 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 AMMECR1Q9Y4X0 333 aaPredicted RBP6.96□□□□□ -1.29
CTNND1-207ENST00000426142 SPAG17Q6Q759 2223 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 RP1L1Q8IWN7 2480 aaPredicted RBP6.96□□□□□ -1.29
CTNND1-207ENST00000426142 G3V3Q6 166 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 K7ESF4 209 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 GREM1O60565 184 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 GFRA3O60609 400 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 SP9P0CG40 484 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 S100A4P26447 101 aaKnown RBP6.96□□□□□ -1.29
CTNND1-207ENST00000426142 GAMTQ14353 236 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 TRAT1Q6PIZ9 186 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 TBC1D26Q86UD7 250 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 GPA33Q99795 319 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 OR6C3Q9NZP0 311 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 TAF1LQ8IZX4 1826 aa6.96□□□□□ -1.29
CTNND1-207ENST00000426142 NRXN2Q9P2S2 1712 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 ZNF320A2RRD8 509 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 XKRY2A2RUG3 117 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 MIDNQ504T8 468 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 TIPARPQ7Z3E1 657 aaKnown RBP6.96□□□□□ -1.3
CTNND1-207ENST00000426142 ZNF764Q96H86 408 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-207ENST00000426142 ABHD1Q96SE0 405 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 CABLES2Q9BTV7 478 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 ABHD14AQ9BUJ0 271 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 AAMDCQ9H7C9 122 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 COA4Q9NYJ1 87 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 NAGKQ9UJ70 344 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 TMED3Q9Y3Q3 217 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 ARPC4-TTLL3A0A0A6YYG9 625 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 C16orf97H3BN30 126 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 SPINK4O60575 86 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 TMEM127O75204 238 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 UPK3AO75631 287 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 ORM2P19652 201 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 PMELP40967 661 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 ID4P47928 161 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 LYZP61626 148 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 MRPS11P82912 194 aaKnown RBP6.96□□□□□ -1.3
CTNND1-207ENST00000426142 FAM3AP98173 230 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 PLPPR5Q32ZL2 321 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 FNDC7Q5VTL7 733 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 ZNF441Q8N8Z8 693 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 FGF11Q92914 225 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 ZNF488Q96MN9 340 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 BRWD1Q9NSI6 2320 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 SCN4AP35499 1836 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 A0A1W2PPE3 182 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 ATP6V1G2-DDX39BF2Z307 99 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 SLC25A5P05141 298 aaKnown RBP6.96□□□□□ -1.3
CTNND1-207ENST00000426142 GP1BAP07359 652 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 FCER1GP30273 86 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 ACAA2P42765 397 aaKnown RBP6.96□□□□□ -1.3
CTNND1-207ENST00000426142 FGF8P55075 233 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-207ENST00000426142 MGAT2Q10469 447 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 CLPPQ16740 277 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-207ENST00000426142 FBXW9Q5XUX1 488 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 FAM219AQ8IW50 185 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 GMPPAQ96IJ6 420 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-207ENST00000426142 RHOFQ9HBH0 211 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 RNF7Q9UBF6 113 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 PILRBQ9UKJ0 227 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 PCM1Q15154 2024 aa6.96□□□□□ -1.3
CTNND1-207ENST00000426142 A0A0J9YW62 118 aa6.95□□□□□ -1.3
CTNND1-207ENST00000426142 LRRC3CA6NJW4 275 aa6.95□□□□□ -1.3
CTNND1-207ENST00000426142 TRDCB7Z8K6 153 aa6.95□□□□□ -1.3
CTNND1-207ENST00000426142 PRSS23O95084 383 aa6.95□□□□□ -1.3
CTNND1-207ENST00000426142 OR4A8P0C604 315 aa6.95□□□□□ -1.3
CTNND1-207ENST00000426142 SMIM17P0DL12 118 aa6.95□□□□□ -1.3
CTNND1-207ENST00000426142 OR2J1Q9GZK6 312 aa6.95□□□□□ -1.3
CTNND1-207ENST00000426142 SLC52A3Q9NQ40 469 aa6.95□□□□□ -1.3
CTNND1-207ENST00000426142 TRBV5-3A0A0A0MS03 114 aa6.95□□□□□ -1.3
CTNND1-207ENST00000426142 DNASE2O00115 360 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-207ENST00000426142 F2RL2O00254 374 aa6.95□□□□□ -1.3
CTNND1-207ENST00000426142 SMAD7O15105 426 aaKnown RBP6.95□□□□□ -1.3
CTNND1-207ENST00000426142 ADAP1O75689 374 aa6.95□□□□□ -1.3
CTNND1-207ENST00000426142 CEACAM3P40198 252 aa6.95□□□□□ -1.3
CTNND1-207ENST00000426142 GZMKP49863 264 aa6.95□□□□□ -1.3
CTNND1-207ENST00000426142 STARD6P59095 220 aa6.95□□□□□ -1.3
CTNND1-207ENST00000426142 DEFA6Q01524 100 aa6.95□□□□□ -1.3
CTNND1-207ENST00000426142 ETV3LQ6ZN32 361 aa6.95□□□□□ -1.3
CTNND1-207ENST00000426142 WDR31Q8NA23 367 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms