RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 RAB3AP20336 220 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 C21orf33P30042 268 aaPredicted RBP10.55□□□□□ -0.72
VRK3-203ENST00000424804 EDDM3BP56851 147 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 ERVK11-1P61568 191 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 GUCA2AQ02747 115 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 BLMHQ13867 455 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 CCDC58Q4VC31 144 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 IZUMO2Q6UXV1 221 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 FAM58AQ8N1B3 248 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 OR52N1Q8NH53 320 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 PIFOQ8TCI5 191 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 RGP1Q92546 391 aaPredicted RBP10.55□□□□□ -0.72
VRK3-203ENST00000424804 ORAI1Q96D31 301 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 SMIM19Q96E16 107 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 FAM192AQ9GZU8 254 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 MEGF9Q9H1U4 602 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 HES4Q9HCC6 221 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 TCF7L1Q9HCS4 588 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 C19orf12Q9NSK7 152 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 SCN3BQ9NY72 215 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 CNOT2Q9NZN8 540 aaKnown RBP10.55□□□□□ -0.72
VRK3-203ENST00000424804 GSTK1Q9Y2Q3 226 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 ZNF281Q9Y2X9 895 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 SIGLEC9Q9Y336 463 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 FAM96BQ9Y3D0 163 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 NOTCH3Q9UM47 2321 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 SIRPB1O00241 398 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 HAND1O96004 215 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 TK1P04183 234 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 CHRM2P08172 466 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 GABRR1P24046 479 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 PAX6P26367 422 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 TGFBR2P37173 567 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 RPL31P62899 125 aaKnown RBP10.54□□□□□ -0.72
VRK3-203ENST00000424804 SCN1BQ07699 218 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 PDZK1IP1Q13113 114 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 EDDM3AQ14507 147 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 C6orf141Q5SZD1 244 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 GDPD3Q7L5L3 318 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 C1QL4Q86Z23 238 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 Q8IYB0 196 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 BEND2Q8NDZ0 799 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 OR51A2Q8NGJ7 313 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 GHSRQ92847 366 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 TMEM106AQ96A25 262 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 CHST6Q9GZX3 395 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 PLCXD1Q9NUJ7 323 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 FBLN5Q9UBX5 448 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 GLS2Q9UI32 602 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 ERGIC3Q9Y282 383 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 DSCAML1Q8TD84 2053 aa10.54□□□□□ -0.72
VRK3-203ENST00000424804 TRBV23-1A0A0A0MS06 115 aa10.53□□□□□ -0.72
VRK3-203ENST00000424804 A0A1W2PPK0 400 aa10.53□□□□□ -0.72
VRK3-203ENST00000424804 MEIOCA2RUB1 952 aa10.53□□□□□ -0.72
VRK3-203ENST00000424804 OGG1O15527 345 aa10.53□□□□□ -0.72
VRK3-203ENST00000424804 EFNB2P52799 333 aa10.53□□□□□ -0.72
VRK3-203ENST00000424804 WNT4P56705 351 aa10.53□□□□□ -0.72
VRK3-203ENST00000424804 ERVFRD-1P60508 538 aa10.53□□□□□ -0.72
VRK3-203ENST00000424804 PPP3R1P63098 170 aa10.53□□□□□ -0.72
VRK3-203ENST00000424804 ACSM1Q08AH1 577 aa10.53□□□□□ -0.72
VRK3-203ENST00000424804 KISS1Q15726 138 aa10.53□□□□□ -0.72
VRK3-203ENST00000424804 DHRS7BQ6IAN0 325 aaPredicted RBP10.53□□□□□ -0.72
VRK3-203ENST00000424804 PARP16Q8N5Y8 322 aa10.53□□□□□ -0.72
VRK3-203ENST00000424804 FAM110DQ8TAY7 271 aaPredicted RBP10.53□□□□□ -0.72
VRK3-203ENST00000424804 FBLIM1Q8WUP2 373 aa10.53□□□□□ -0.72
VRK3-203ENST00000424804 TNFAIP8L1Q8WVP5 186 aa10.53□□□□□ -0.72
VRK3-203ENST00000424804 MYDGFQ969H8 173 aa10.53□□□□□ -0.72
VRK3-203ENST00000424804 CNBD2Q96M20 576 aa10.53□□□□□ -0.72
VRK3-203ENST00000424804 NR1H4Q96RI1 486 aaPredicted RBP10.53□□□□□ -0.72
VRK3-203ENST00000424804 CCDC90BQ9GZT6 254 aa10.53□□□□□ -0.72
VRK3-203ENST00000424804 METTL8Q9H825 291 aaKnown RBP10.53□□□□□ -0.72
VRK3-203ENST00000424804 EXOSC4Q9NPD3 245 aaKnown RBP10.53□□□□□ -0.72
VRK3-203ENST00000424804 ING3Q9NXR8 418 aa10.53□□□□□ -0.72
VRK3-203ENST00000424804 PCDHGB5Q9Y5G0 923 aa10.53□□□□□ -0.72
VRK3-203ENST00000424804 IGKV1-12A0A0C4DH73 117 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 A0A1W2PPH5 198 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 H0YJX3 145 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 H3BUX3 64 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 ATP6V1G2O95670 118 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 IGKV1D-12P01611 117 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 MT-ND2P03891 347 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 CDK1P06493 297 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 ZNF44P15621 663 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 CCL3L1P16619 93 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 CELP19835 753 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 EEF1B2P24534 225 aaKnown RBP10.52□□□□□ -0.73
VRK3-203ENST00000424804 KIR2DS4P43632 304 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 TAS2R43P59537 309 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 GRK1Q15835 563 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 DDI2Q5TDH0 399 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 DMKNQ6E0U4 476 aaPredicted RBP10.52□□□□□ -0.73
VRK3-203ENST00000424804 TPRX1Q8N7U7 411 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 OR52N4Q8NGI2 321 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 OR10K1Q8NGX5 313 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 OR5R1Q8NH85 324 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 CFHR4Q92496 578 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 SGCDQ92629 289 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 CPNE2Q96FN4 548 aaPredicted RBP10.52□□□□□ -0.73
VRK3-203ENST00000424804 PPA2Q9H2U2 334 aa10.52□□□□□ -0.73
VRK3-203ENST00000424804 HMG20AQ9NP66 347 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms