RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ZNF318Q5VUA4 2279 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 H3BP45 60 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 IL18BPO95998 194 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 CTSSP25774 331 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 CHATP28329 748 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 CALCRP30988 508 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 RPS16P62249 146 aaKnown RBP10.25□□□□□ -0.77
PTPRN-204ENST00000423636 TLE1Q04724 770 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 FOXF2Q12947 444 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 DAZAP2Q15038 168 aaPredicted RBP10.25□□□□□ -0.77
PTPRN-204ENST00000423636 PLEKHN1Q494U1 663 aaPredicted RBP10.25□□□□□ -0.77
PTPRN-204ENST00000423636 GGNBP1Q5YKI7 109 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 ADAMTS17Q8TE56 1095 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 EXTL1Q92935 676 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 SYT3Q9BQG1 590 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 PCDHB10Q9UN67 800 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 TRGV5A0A0B4J1U4 118 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 ZNF816-ZNF321PA0A0X1KG74 233 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 FTH1P19P0C7X4 201 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 ZNF728P0DKX0 622 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 SSBP1Q04837 148 aaKnown RBP10.24□□□□□ -0.77
PTPRN-204ENST00000423636 MALLQ13021 153 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 OR2B11Q5JQS5 317 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 VWA1Q6PCB0 445 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 RPRMLQ8N4K4 120 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 OR51H1Q8NH63 302 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 LHFPL5Q8TAF8 219 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 BCL2L14Q9BZR8 327 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 SLC2A8Q9NY64 477 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 SLC22A20A6NK97 555 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 PCP4L1A6NKN8 68 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 LRP3O75074 770 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 RPS2P15880 293 aaKnown RBP10.24□□□□□ -0.77
PTPRN-204ENST00000423636 FABP6P51161 128 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 LINC00205P59089 165 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 AIMP2Q13155 320 aaKnown RBP10.24□□□□□ -0.77
PTPRN-204ENST00000423636 VHLLQ6RSH7 139 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 BPIFCQ8NFQ6 507 aa10.24□□□□□ -0.77
PTPRN-204ENST00000423636 IGKV1D-13A0A0B4J2D9 117 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 MFSD2BA6NFX1 497 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 FOXI3A8MTJ6 420 aaPredicted RBP10.23□□□□□ -0.77
PTPRN-204ENST00000423636 TMEM127O75204 238 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 IFNA2P01563 188 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 IL2RAP01589 272 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 IGKV1-13P0DP09 117 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 FPR2P25090 351 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 SNTB1Q13884 538 aaKnown RBP10.23□□□□□ -0.77
PTPRN-204ENST00000423636 GLRX5Q86SX6 157 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 SGPP2Q8IWX5 399 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 OR6K3Q8NGY3 331 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 ERGIC1Q969X5 290 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 TP53RKQ96S44 253 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 TRAF4Q9BUZ4 470 aaPredicted RBP10.23□□□□□ -0.77
PTPRN-204ENST00000423636 DDA1Q9BW61 102 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 CD300LBA8K4G0 201 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 CDIPTO14735 213 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 WNT9BO14905 357 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 BCL2L11O43521 198 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 CD46P15529 392 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 TAS2R46P59540 309 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 DHODHQ02127 395 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 CLINT1Q14677 625 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 FOXL2NBQ6ZUU3 175 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 KCNRGQ8N5I3 272 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 TMEM217Q8N7C4 229 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 IER2Q9BTL4 223 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 MSL2Q9HCI7 577 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 RNF150Q9ULK6 438 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 ZNF175Q9Y473 711 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 SERPINE3A8MV23 424 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 ZNF705EA8MWA4 302 aaPredicted RBP10.23□□□□□ -0.77
PTPRN-204ENST00000423636 PROB1E7EW31 1015 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 GPR31O00270 319 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 C4BPBP20851 252 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 PLP2Q04941 152 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 VAX1Q5SQQ9 334 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 ARRDC1Q8N5I2 433 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 HSD17B11Q8NBQ5 300 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 SLC2A9Q9NRM0 540 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 TINAGQ9UJW2 476 aa10.23□□□□□ -0.77
PTPRN-204ENST00000423636 KLRC4-KLRK1H3BQV0 150 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 K7EM74 188 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 CNOT4O95628 575 aaKnown RBP10.22□□□□□ -0.77
PTPRN-204ENST00000423636 CD8AP01732 235 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 UBBP0CG47 229 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 FUT6P51993 359 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 RBM11P57052 281 aaKnown RBP10.22□□□□□ -0.77
PTPRN-204ENST00000423636 PCBD1P61457 104 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 NHLH2Q02577 135 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 LHFPL1Q86WI0 220 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 MRPS24Q96EL2 167 aaKnown RBP10.22□□□□□ -0.77
PTPRN-204ENST00000423636 ARPC5LQ9BPX5 153 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 BCO1Q9HAY6 547 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 APOC1P02654 83 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 PRKACBP22694 351 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 LHFPL2Q6ZUX7 228 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 SLC30A7Q8NEW0 376 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 HIST1H2AAQ96QV6 131 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 CCL28Q9NRJ3 127 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 RBM7Q9Y580 266 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms