RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 XRCC3O43542 346 aa8.46□□□□□ -1.06
CMSS1-201ENST00000421999 HOXB1P14653 301 aaPredicted RBP8.46□□□□□ -1.06
CMSS1-201ENST00000421999 PPP3CBP16298 524 aa8.46□□□□□ -1.06
CMSS1-201ENST00000421999 ERP29P30040 261 aaKnown RBP8.46□□□□□ -1.06
CMSS1-201ENST00000421999 ZNF362Q5T0B9 420 aaPredicted RBP8.46□□□□□ -1.06
CMSS1-201ENST00000421999 C9orf106Q8NAJ2 232 aa8.46□□□□□ -1.06
CMSS1-201ENST00000421999 FREM3P0C091 2139 aa8.46□□□□□ -1.06
CMSS1-201ENST00000421999 KRASP01116 189 aa8.46□□□□□ -1.06
CMSS1-201ENST00000421999 ZNF708P17019 499 aa8.46□□□□□ -1.06
CMSS1-201ENST00000421999 HBG1P69891 147 aa8.46□□□□□ -1.06
CMSS1-201ENST00000421999 HBG2P69892 147 aa8.46□□□□□ -1.06
CMSS1-201ENST00000421999 ZNF816Q0VGE8 651 aaPredicted RBP8.46□□□□□ -1.06
CMSS1-201ENST00000421999 TMEM268Q5VZI3 342 aa8.46□□□□□ -1.06
CMSS1-201ENST00000421999 NHLRC1Q6VVB1 395 aa8.46□□□□□ -1.06
CMSS1-201ENST00000421999 CATSPERDQ86XM0 798 aa8.46□□□□□ -1.06
CMSS1-201ENST00000421999 ZNF488Q96MN9 340 aa8.46□□□□□ -1.06
CMSS1-201ENST00000421999 PURGQ9UJV8 347 aaKnown RBP8.46□□□□□ -1.06
CMSS1-201ENST00000421999 LHFPL6Q9Y693 200 aa8.46□□□□□ -1.06
CMSS1-201ENST00000421999 UNC80Q8N2C7 3258 aa8.46□□□□□ -1.06
CMSS1-201ENST00000421999 C1QTNF9BB2RNN3 333 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 AGPAT2O15120 278 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 GPR37O15354 613 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 SIX6O95475 246 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 C1QTNF9P0C862 333 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 HIST1H1DP16402 221 aaKnown RBP8.45□□□□□ -1.06
CMSS1-201ENST00000421999 SUB1P53999 127 aaKnown RBP eCLIP8.45□□□□□ -1.067e-8■■■■■ 35.5
CMSS1-201ENST00000421999 PIGPP57054 158 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 PLAURQ03405 335 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 TMEM91Q6ZNR0 172 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 NOXA1Q86UR1 476 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 LIN7CQ9NUP9 197 aaKnown RBP8.45□□□□□ -1.06
CMSS1-201ENST00000421999 TRANK1O15050 2925 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 CDRT15L2A8MXV6 281 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 I3L521 148 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 NKX2-1P43699 371 aaPredicted RBP8.45□□□□□ -1.06
CMSS1-201ENST00000421999 ELP2Q6IA86 826 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 DTX1Q86Y01 620 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 LRRC75AQ8NAA5 344 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 MAP6Q96JE9 813 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 KCNK15Q9H427 330 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 ZNF665Q9H7R5 613 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 LSM2Q9Y333 95 aaKnown RBP8.45□□□□□ -1.06
CMSS1-201ENST00000421999 SPTBN4Q9H254 2564 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 PIEZO2Q9H5I5 2752 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 ZNF106Q9H2Y7 1883 aaKnown RBP8.45□□□□□ -1.06
CMSS1-201ENST00000421999 TRAV8-7A0A075B6U6 113 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 HAND1O96004 215 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 TTRP02766 147 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 CD80P33681 288 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 CEACAM3P40198 252 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 LHX2P50458 406 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 GAS1P54826 345 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 ZNF826PQ6ZT77 177 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 NAA40Q86UY6 237 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 ZNF837Q96EG3 531 aaPredicted RBP8.45□□□□□ -1.06
CMSS1-201ENST00000421999 C20orf85Q9H1P6 137 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 WDR13Q9H1Z4 485 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 ST6GALNAC2Q9UJ37 374 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 GEMIN2O14893 280 aaKnown RBP8.45□□□□□ -1.06
CMSS1-201ENST00000421999 ETV6P41212 452 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 PRRX1P54821 245 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 RAP2BP61225 183 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 RPL31P62899 125 aaKnown RBP8.45□□□□□ -1.06
CMSS1-201ENST00000421999 BAXQ07812 192 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 TIMM23BQ5SRD1 257 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 ADAT3Q96EY9 351 aaPredicted RBP8.45□□□□□ -1.06
CMSS1-201ENST00000421999 WDYHV1Q96HA8 205 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 POFUT1Q9H488 388 aa8.45□□□□□ -1.06
CMSS1-201ENST00000421999 DENND4AQ7Z401 1863 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 NKX2-6A6NCS4 301 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 TSPAN15O95858 294 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 GALP22466 123 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 CLDN18P56856 261 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 PNLIPRP3Q17RR3 467 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 Q3ZCU0 254 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 SPANXN5Q5MJ07 72 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 MOB1BQ7L9L4 216 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 OR2W3Q7Z3T1 314 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 TPRX1Q8N7U7 411 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 SULT4A1Q9BR01 284 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 CHST5Q9GZS9 411 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 HEXA-AS1Q9H8Q6 139 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 TMEM272A0A1B0GTI8 110 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 NAT2P11245 290 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 KIR3DL2P43630 455 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 UBE2MP61081 183 aaKnown RBP8.44□□□□□ -1.06
CMSS1-201ENST00000421999 PLA2G7Q13093 441 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 A0A1W2PNU3 283 aaPredicted RBP8.44□□□□□ -1.06
CMSS1-201ENST00000421999 NPIPB13A6NJU9 1138 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 C10orf142B7Z368 130 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 NPIPB4C9JG80 1138 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 ST8SIA3O43173 380 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 S100A6P06703 90 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 BCL3P20749 454 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 ERHP84090 104 aaKnown RBP8.44□□□□□ -1.06
CMSS1-201ENST00000421999 GK2Q14410 553 aaPredicted RBP8.44□□□□□ -1.06
CMSS1-201ENST00000421999 C1orf174Q8IYL3 243 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 RBMXL1Q96E39 390 aaKnown RBP8.44□□□□□ -1.06
CMSS1-201ENST00000421999 AKR1E2Q96JD6 320 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 CCL13Q99616 98 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms