RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 IGHA1P01876 353 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 IGHA2P01877 340 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 HIST1H1DP16402 221 aaKnown RBP9.94□□□□□ -0.82
PTCH1-205ENST00000418258 HTR1DP28221 377 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 DRD3P35462 400 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 ZNF141Q15928 474 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 SLC7A10Q9NS82 523 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 RABAC1Q9UI14 185 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 PCMT1P22061 227 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 VAMP3Q15836 100 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 SLC16A12Q6ZSM3 486 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 RELL2Q8NC24 303 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-205ENST00000418258 ABHD3Q8WU67 409 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 ASB10Q8WXI3 467 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 FAM60AQ9NP50 221 aa9.94□□□□□ -0.82
PTCH1-205ENST00000418258 COLQQ9Y215 455 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-205ENST00000418258 CD40P25942 277 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 GALR1P47211 349 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 GGTLC2Q14390 218 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 GTF2H5Q6ZYL4 71 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 PTP4A1Q93096 173 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 AP5S1Q9NUS5 200 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 J3QR89 54 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 BMPR1BO00238 502 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 KCNMB1Q16558 191 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 KIAA1958Q8N8K9 716 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 ZNF764Q96H86 408 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-205ENST00000418258 CLN8Q9UBY8 286 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 HAND1O96004 215 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 MIDNQ504T8 468 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 STPG1Q5TH74 334 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 LILRA6Q6PI73 481 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 SMRP1Q8NCR6 262 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 RAB40CQ96S21 281 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 NXF2Q9GZY0 626 aaKnown RBP9.93□□□□□ -0.82
PTCH1-205ENST00000418258 ZMIZ1Q9ULJ6 1067 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 SIPA1L3O60292 1781 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-205ENST00000418258 CACNA1IQ9P0X4 2223 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 PNPP00491 289 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 CLDN20P56880 219 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 FAHD1Q6P587 224 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 BAP18Q8IXM2 172 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 OR5C1Q8NGR4 320 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 OR6X1Q8NH79 312 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 FGF11Q92914 225 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 CHODLQ9H9P2 273 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 IL20Q9NYY1 176 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 OR5AL1P0C617 328 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 OR5AC1P0C628 307 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 VSTM2AQ8TAG5 236 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 LURAP1Q96LR2 239 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 ASCL3Q9NQ33 180 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 HAX1O00165 279 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 HOXB3P14651 431 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-205ENST00000418258 NPY1RP25929 384 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 HIKESHIQ53FT3 197 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 NUBPLQ8TB37 319 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 MS4A5Q9H3V2 200 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 HEXA-AS1Q9H8Q6 139 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 RASL12Q9NYN1 266 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 WASHC3Q9Y3C0 194 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 PATJQ8NI35 1801 aa9.93□□□□□ -0.82
PTCH1-205ENST00000418258 TEX50A0A1B0GTY4 177 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 AVPR2P30518 371 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 COMMD1Q8N668 190 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 RNF2Q99496 336 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 CES1P1Q9UKY3 287 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 MARF1Q9Y4F3 1742 aaKnown RBP9.92□□□□□ -0.82
PTCH1-205ENST00000418258 SBK3P0C264 359 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 BCL3P20749 454 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 ZBTB37Q5TC79 503 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 ASB5Q8WWX0 329 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 ZNF707Q96C28 371 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-205ENST00000418258 ADTRPQ96IZ2 230 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 DUSP15Q9H1R2 295 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-205ENST00000418258 CTGFP29279 349 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 MRPS11P82912 194 aaKnown RBP9.92□□□□□ -0.82
PTCH1-205ENST00000418258 LINC00303Q3SY05 128 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 TMEM88Q6PEY1 159 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 C5orf17Q8NAS9 161 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 WDR13Q9H1Z4 485 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 ZNF665Q9H7R5 613 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 CNTD2Q9H8S5 307 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 MPC1Q9Y5U8 109 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 CT62P0C5K7 136 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 RNF224P0DH78 156 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 YBX1P67809 324 aaKnown RBP9.92□□□□□ -0.82
PTCH1-205ENST00000418258 KLHDC1Q8N7A1 406 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 ASB13Q8WXK3 278 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 GSX2Q9BZM3 304 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 NIT2Q9NQR4 276 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 NAT8BQ9UHF3 227 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 LIPGQ9Y5X9 500 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 DOPEY2Q9Y3R5 2298 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 A0A1B0GTQ1 180 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 PDCD6O75340 191 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 SPCS3P61009 180 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 RIMKLAQ8IXN7 391 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 OR8B12Q8NGG6 310 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 VSTM2LQ96N03 204 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms