RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 GALP22466 123 aa19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 GABRR1P24046 479 aa19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 ARF6P62330 175 aa19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 SCN1BQ07699 218 aa19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 GDPD3Q7L5L3 318 aa19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 OR8H2Q8N162 312 aa19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 TSPAN14Q8NG11 270 aa19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 OR51T1Q8NGJ9 327 aa19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 MUL1Q969V5 352 aa19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 UPRTQ96BW1 309 aa19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 WDFY2Q96P53 400 aa19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 NR1H4Q96RI1 486 aaPredicted RBP19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 NKX3-1Q99801 234 aaPredicted RBP19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 PPIL3Q9H2H8 161 aaKnown RBP19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 VCX3AQ9NNX9 186 aa19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 ARHGAP32A7KAX9 2087 aa19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 DNHD1Q96M86 4753 aa19.06■□□□□ 0.64
SMARCB1-205ENST00000417137 DOCK11Q5JSL3 2073 aa19.06■□□□□ 0.64
SMARCB1-205ENST00000417137 OR2H2O95918 312 aa19.06■□□□□ 0.64
SMARCB1-205ENST00000417137 ZNF44P15621 663 aa19.06■□□□□ 0.64
SMARCB1-205ENST00000417137 LMO1P25800 156 aa19.06■□□□□ 0.64
SMARCB1-205ENST00000417137 RPL31P62899 125 aaKnown RBP19.06■□□□□ 0.64
SMARCB1-205ENST00000417137 BLMHQ13867 455 aa19.06■□□□□ 0.64
SMARCB1-205ENST00000417137 AWAT2Q6E213 333 aa19.06■□□□□ 0.64
SMARCB1-205ENST00000417137 GLIPR1L1Q6UWM5 242 aa19.06■□□□□ 0.64
SMARCB1-205ENST00000417137 LRRTM1Q86UE6 522 aa19.06■□□□□ 0.64
SMARCB1-205ENST00000417137 OSR2Q8N2R0 312 aa19.06■□□□□ 0.64
SMARCB1-205ENST00000417137 KIR3DL3Q8N743 410 aa19.06■□□□□ 0.64
SMARCB1-205ENST00000417137 OR10K1Q8NGX5 313 aa19.06■□□□□ 0.64
SMARCB1-205ENST00000417137 ONECUT1Q9UBC0 465 aa19.06■□□□□ 0.64
SMARCB1-205ENST00000417137 GHRLQ9UBU3 117 aa19.06■□□□□ 0.64
SMARCB1-205ENST00000417137 TRDV1A0A1B0GX56 115 aa19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 TMEM82A0PJX8 343 aa19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 SIRPB1O00241 398 aa19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 GTF2F2P13984 249 aa19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 SERPINA2P20848 420 aa19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 CALRP27797 417 aaKnown RBP19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 RANBP1P43487 201 aa19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 IL13RA2Q14627 380 aa19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 GRK1Q15835 563 aa19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 SLC22A6Q4U2R8 563 aa19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 SYT6Q5T7P8 510 aaPredicted RBP19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 CD200R1LQ6Q8B3 271 aa19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 C17orf107Q6ZR85 190 aa19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 C1orf122Q6ZSJ8 110 aa19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 LYPD6Q86Y78 171 aa19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 FAM185AQ8N0U4 392 aa19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 MRPS24Q96EL2 167 aaKnown RBP19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 PCGF1Q9BSM1 259 aa19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 NUP50Q9UKX7 468 aa19.05■□□□□ 0.64
SMARCB1-205ENST00000417137 FBN3Q75N90 2809 aa19.04■□□□□ 0.64
SMARCB1-205ENST00000417137 FUOMA2VDF0 154 aa19.04■□□□□ 0.64
SMARCB1-205ENST00000417137 MGST3O14880 152 aa19.04■□□□□ 0.64
SMARCB1-205ENST00000417137 FPR2P25090 351 aa19.04■□□□□ 0.64
SMARCB1-205ENST00000417137 PSMD7P51665 324 aa19.04■□□□□ 0.64
SMARCB1-205ENST00000417137 EDDM3BP56851 147 aa19.04■□□□□ 0.64
SMARCB1-205ENST00000417137 PDCD1Q15116 288 aa19.04■□□□□ 0.64
SMARCB1-205ENST00000417137 NEDD8Q15843 81 aa19.04■□□□□ 0.64
SMARCB1-205ENST00000417137 NHLRC3Q5JS37 347 aa19.04■□□□□ 0.64
SMARCB1-205ENST00000417137 OR4M1Q8NGD0 313 aa19.04■□□□□ 0.64
SMARCB1-205ENST00000417137 ZNF696Q9H7X3 374 aa19.04■□□□□ 0.64
SMARCB1-205ENST00000417137 ST3GAL6Q9Y274 331 aa19.04■□□□□ 0.64
SMARCB1-205ENST00000417137 WNK2Q9Y3S1 2297 aa19.03■□□□□ 0.64
SMARCB1-205ENST00000417137 A0A0G2JK05 382 aa19.03■□□□□ 0.64
SMARCB1-205ENST00000417137 M0R1W7 72 aa19.03■□□□□ 0.64
SMARCB1-205ENST00000417137 PSPNO60542 156 aa19.03■□□□□ 0.64
SMARCB1-205ENST00000417137 FSHBP01225 129 aa19.03■□□□□ 0.64
SMARCB1-205ENST00000417137 UBBP0CG47 229 aa19.03■□□□□ 0.64
SMARCB1-205ENST00000417137 EPHA1P21709 976 aa19.03■□□□□ 0.64
SMARCB1-205ENST00000417137 Q6P435 159 aa19.03■□□□□ 0.64
SMARCB1-205ENST00000417137 LINC00596Q86U02 117 aa19.03■□□□□ 0.64
SMARCB1-205ENST00000417137 OR4D6Q8NGJ1 314 aa19.03■□□□□ 0.64
SMARCB1-205ENST00000417137 SIRPDQ9H106 197 aa19.03■□□□□ 0.64
SMARCB1-205ENST00000417137 C19orf12Q9NSK7 152 aa19.03■□□□□ 0.64
SMARCB1-205ENST00000417137 hCG_1809904A0A1W2PP81 198 aa19.02■□□□□ 0.64
SMARCB1-205ENST00000417137 A0A1W2PPE2 198 aa19.02■□□□□ 0.64
SMARCB1-205ENST00000417137 A0A1W2PR64 198 aa19.02■□□□□ 0.64
SMARCB1-205ENST00000417137 A0A1W2PRV1 198 aa19.02■□□□□ 0.64
SMARCB1-205ENST00000417137 PDCD5O14737 125 aa19.02■□□□□ 0.64
SMARCB1-205ENST00000417137 MMP9P14780 707 aa19.02■□□□□ 0.64
SMARCB1-205ENST00000417137 MYL9P24844 172 aa19.02■□□□□ 0.64
SMARCB1-205ENST00000417137 RBM11P57052 281 aaKnown RBP19.02■□□□□ 0.64
SMARCB1-205ENST00000417137 BPIFB3P59826 476 aa19.02■□□□□ 0.64
SMARCB1-205ENST00000417137 MEF2CQ06413 473 aaPredicted RBP19.02■□□□□ 0.64
SMARCB1-205ENST00000417137 C1orf100Q5SVJ3 147 aa19.02■□□□□ 0.64
SMARCB1-205ENST00000417137 GPR157Q5UAW9 335 aa19.02■□□□□ 0.64
SMARCB1-205ENST00000417137 TMEM200BQ69YZ2 307 aa19.02■□□□□ 0.64
SMARCB1-205ENST00000417137 OR4S1Q8NGB4 309 aa19.02■□□□□ 0.64
SMARCB1-205ENST00000417137 CHST6Q9GZX3 395 aa19.02■□□□□ 0.64
SMARCB1-205ENST00000417137 STUB1Q9UNE7 303 aa19.02■□□□□ 0.64
SMARCB1-205ENST00000417137 SSR3Q9UNL2 185 aa19.02■□□□□ 0.64
SMARCB1-205ENST00000417137 TRAV1-2A0A0B4J238 106 aa19.01■□□□□ 0.63
SMARCB1-205ENST00000417137 CD37P11049 281 aa19.01■□□□□ 0.63
SMARCB1-205ENST00000417137 HTR2CP28335 458 aa19.01■□□□□ 0.63
SMARCB1-205ENST00000417137 ERP29P30040 261 aaKnown RBP19.01■□□□□ 0.63
SMARCB1-205ENST00000417137 EDDM3AQ14507 147 aa19.01■□□□□ 0.63
SMARCB1-205ENST00000417137 PIGYQ3MUY2 71 aa19.01■□□□□ 0.63
SMARCB1-205ENST00000417137 KLF17Q5JT82 389 aaPredicted RBP19.01■□□□□ 0.63
SMARCB1-205ENST00000417137 TBX15Q96SF7 602 aa19.01■□□□□ 0.63
SMARCB1-205ENST00000417137 CST11Q9H112 138 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms