RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 COX11Q9Y6N1 276 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 FER1L4A9Z1Z3 1794 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 ZMYM2Q9UBW7 1377 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 A0A087WXM4 84 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 TCRBV7S3A2A0A539 114 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 WDR27A2RRH5 827 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 MSGN1A6NI15 193 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 SRRM4A7MD48 611 aaKnown RBP3.05□□□□□ -1.92
SF3B1-203ENST00000414174 C2CD4DB7Z1M9 353 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF814B7Z6K7 855 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 INMT-MINDY4F8WBC2 141 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 GABRPO00591 440 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 GAPDHSO14556 408 aaPredicted RBP3.05□□□□□ -1.92
SF3B1-203ENST00000414174 HSPB6O14558 160 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 CDRT1O95170 752 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 SOX14O95416 240 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 LSM8O95777 96 aaKnown RBP3.05□□□□□ -1.92
SF3B1-203ENST00000414174 AIFM1O95831 613 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 CLDN1O95832 211 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 MOSP00540 346 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 APOC3P02656 99 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 OR5AC1P0C628 307 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 FAM157CP0CG43 387 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 PVRP15151 417 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 GGT1P19440 569 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 RPS3P23396 243 aaKnown RBP eCLIP3.05□□□□□ -1.924e-13■□□□□ 8.3
SF3B1-203ENST00000414174 EDNRAP25101 427 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 ATP6V0CP27449 155 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 BLVRBP30043 206 aaPredicted RBP3.05□□□□□ -1.92
SF3B1-203ENST00000414174 TGFBR1P36897 503 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 PGFP49763 221 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 GNG4P50150 75 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 SSR4P51571 173 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 TAS2R20P59543 309 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 RPS14P62263 151 aaKnown RBP3.05□□□□□ -1.92
SF3B1-203ENST00000414174 RPS25P62851 125 aaKnown RBP3.05□□□□□ -1.92
SF3B1-203ENST00000414174 PSG9Q00887 426 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 SMAGPQ0VAQ4 97 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 RAB40BQ12829 278 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 SLC10A2Q12908 348 aaPredicted RBP3.05□□□□□ -1.92
SF3B1-203ENST00000414174 PEA15Q15121 130 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 PLK5Q496M5 336 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF542PQ5EBM4 170 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 ASPHD1Q5U4P2 390 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 EIF5AL1Q6IS14 154 aaKnown RBP3.05□□□□□ -1.92
SF3B1-203ENST00000414174 C8orf82Q6P1X6 216 aaPredicted RBP3.05□□□□□ -1.92
SF3B1-203ENST00000414174 ARL9Q6T311 187 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 ALKAL1Q6UXT8 129 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 C12orf54Q6X4T0 127 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 IL34Q6ZMJ4 242 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 FAM183BPQ6ZVS7 135 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF720Q7Z2F6 126 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 PPP1R27Q86WC6 154 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 C17orf64Q86WR6 236 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 VKORC1L1Q8N0U8 176 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 OR4K17Q8NGC6 315 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 OR4K5Q8NGD3 323 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 OR52E2Q8NGJ4 325 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 OR5M3Q8NGP4 307 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 OR2T4Q8NH00 348 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 RAB2BQ8WUD1 216 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 TMEM174Q8WUU8 243 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 THEM6Q8WUY1 208 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 BORCS7Q96B45 105 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 PPCDCQ96CD2 204 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 TMEM101Q96IK0 257 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 NRTNQ99748 197 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 MACROD1Q9BQ69 325 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 TMEM133Q9H2Q1 129 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF665Q9H7R5 613 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 RNF121Q9H920 327 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 SH2D2AQ9NP31 389 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 KLHL13Q9P2N7 655 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 GALPQ9UBC7 116 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 DKK2Q9UBU2 259 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 Q9UF83 564 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 TBX21Q9UL17 535 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 MMP17Q9ULZ9 603 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 BOKQ9UMX3 212 aaPredicted RBP3.05□□□□□ -1.92
SF3B1-203ENST00000414174 SCML2Q9UQR0 700 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 ASF1AQ9Y294 204 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 TMED3Q9Y3Q3 217 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 KLF12Q9Y4X4 402 aa3.05□□□□□ -1.92
SF3B1-203ENST00000414174 SPIN1Q9Y657 262 aaPredicted RBP3.05□□□□□ -1.92
SF3B1-203ENST00000414174 SIRT4Q9Y6E7 314 aaPredicted RBP3.05□□□□□ -1.92
SF3B1-203ENST00000414174 COL22A1Q8NFW1 1626 aaPredicted RBP3.04□□□□□ -1.92
SF3B1-203ENST00000414174 ZFYVE16Q7Z3T8 1539 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 DISP1Q96F81 1524 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 UGGT2Q9NYU1 1516 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 OVOS2A0A0G2JMS6 1433 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 NPHP4O75161 1426 aaPredicted RBP3.04□□□□□ -1.92
SF3B1-203ENST00000414174 CASKIN1Q8WXD9 1431 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 MYH11P35749 1972 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 CCDC195A0A1B0GUA6 201 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.04□□□□□ -1.92
SF3B1-203ENST00000414174 MYADML2A6NDP7 307 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 IFITM10A6NMD0 228 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 D6RAR5 112 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 M0R2Z0 102 aa3.04□□□□□ -1.92
SF3B1-203ENST00000414174 C1QL1O75973 258 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms