RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 OR11H7Q8NGC8 314 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 OR10AG1Q8NH19 301 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 C1QTNF6Q9BXI9 259 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 RBPJLQ9UBG7 517 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 A6NCN8 305 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 DYNLT3P51808 116 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 SRD5A3Q9H8P0 318 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 CACNG4Q9UBN1 327 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 CES1P1Q9UKY3 287 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 SCN7AQ01118 1682 aa11.52□□□□□ -0.56
COL6A3-206ENST00000409809 CER1O95813 267 aa11.52□□□□□ -0.56
COL6A3-206ENST00000409809 KLF3P57682 345 aaPredicted RBP11.52□□□□□ -0.56
COL6A3-206ENST00000409809 DCDP81605 110 aaKnown RBP11.52□□□□□ -0.56
COL6A3-206ENST00000409809 FMODQ06828 376 aa11.52□□□□□ -0.56
COL6A3-206ENST00000409809 CA13Q8N1Q1 262 aa11.52□□□□□ -0.56
COL6A3-206ENST00000409809 ABHD1Q96SE0 405 aa11.52□□□□□ -0.56
COL6A3-206ENST00000409809 FAM234AQ9H0X4 552 aa11.52□□□□□ -0.56
COL6A3-206ENST00000409809 TUBA4BQ9H853 241 aa11.52□□□□□ -0.56
COL6A3-206ENST00000409809 SLC25A22Q9H936 323 aa11.52□□□□□ -0.56
COL6A3-206ENST00000409809 SLC22A13Q9Y226 551 aa11.52□□□□□ -0.56
COL6A3-206ENST00000409809 AHDC1Q5TGY3 1603 aaPredicted RBP11.52□□□□□ -0.56
COL6A3-206ENST00000409809 FBLL1A6NHQ2 334 aaKnown RBP11.52□□□□□ -0.56
COL6A3-206ENST00000409809 B4GALT3O60512 393 aa11.52□□□□□ -0.56
COL6A3-206ENST00000409809 GHRHP01286 108 aa11.52□□□□□ -0.56
COL6A3-206ENST00000409809 ELNP15502 786 aa11.52□□□□□ -0.56
COL6A3-206ENST00000409809 OR1D5P58170 312 aa11.52□□□□□ -0.56
COL6A3-206ENST00000409809 CIRBPQ14011 172 aaKnown RBP11.52□□□□□ -0.56
COL6A3-206ENST00000409809 NHLRC3Q5JS37 347 aa11.52□□□□□ -0.56
COL6A3-206ENST00000409809 CACNG5Q9UF02 275 aa11.52□□□□□ -0.56
COL6A3-206ENST00000409809 DOCK5Q9H7D0 1870 aa11.52□□□□□ -0.56
COL6A3-206ENST00000409809 VENTXO95231 258 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 CXCL3P19876 107 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 UBE2L3P68036 154 aaKnown RBP11.52□□□□□ -0.57
COL6A3-206ENST00000409809 C16orf82Q7Z2V1 217 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 OR1N2Q8NGR9 330 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 ZNF707Q96C28 371 aaPredicted RBP11.52□□□□□ -0.57
COL6A3-206ENST00000409809 ZNF716A6NP11 495 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 TCF23Q7RTU1 214 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 NKAIN4Q8IVV8 208 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 PRSS21Q9Y6M0 314 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 MS4A18H0YCH9 400 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 P2RY2P41231 377 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 TNFRSF4P43489 277 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 ISXQ2M1V0 245 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 MS4A18Q3C1V0 323 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 DNLZQ5SXM8 178 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 SPPL3Q8TCT6 385 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 ZFPL1O95159 310 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 IL4P05112 153 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 GLIPR1P48060 266 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 HSF5Q4G112 596 aaPredicted RBP11.52□□□□□ -0.57
COL6A3-206ENST00000409809 MIEN1Q9BRT3 115 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 ZMIZ1Q9ULJ6 1067 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 CARHSP1Q9Y2V2 147 aaKnown RBP11.52□□□□□ -0.57
COL6A3-206ENST00000409809 PDCD11Q14690 1871 aaKnown RBP11.52□□□□□ -0.57
COL6A3-206ENST00000409809 FER1L5A0AVI2 2057 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 CAMPP49913 170 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 EMP1P54849 157 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 PRSS36Q5K4E3 855 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 RHBDD1Q8TEB9 315 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 TSACCQ96A04 125 aaPredicted RBP11.52□□□□□ -0.57
COL6A3-206ENST00000409809 MS4A6EQ96DS6 147 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 KLF16Q9BXK1 252 aaPredicted RBP11.52□□□□□ -0.57
COL6A3-206ENST00000409809 CDCP1Q9H5V8 836 aa11.52□□□□□ -0.57
COL6A3-206ENST00000409809 FCMRO60667 390 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 CTSCP53634 463 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 OR4S2Q8NH73 311 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 FBXO4Q9UKT5 387 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 AMY1AP04745 511 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 COL8A1P27658 744 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 CA11O75493 328 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 LEPROTL1O95214 131 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 ZNF121P58317 390 aaPredicted RBP11.51□□□□□ -0.57
COL6A3-206ENST00000409809 MRPL54Q6P161 138 aaKnown RBP11.51□□□□□ -0.57
COL6A3-206ENST00000409809 ABCA3Q99758 1704 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 OR5B21A6NL26 309 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 RTP2Q5QGT7 225 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 MRPL30Q8TCC3 161 aaKnown RBP11.51□□□□□ -0.57
COL6A3-206ENST00000409809 RNF133Q8WVZ7 376 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 RPEQ96AT9 228 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 SIGLEC11Q96RL6 698 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 C11orf68Q9H3H3 251 aaKnown RBP11.51□□□□□ -0.57
COL6A3-206ENST00000409809 HLA-DQB1P01920 261 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 ZNF236Q9UL36 1845 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 METRNLQ641Q3 311 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 NDUFAF3Q9BU61 184 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 PDCD6O75340 191 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 GLRA1P23415 457 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 IER3P46695 156 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 SPNS2Q8IVW8 549 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 CNEP1R1Q8N9A8 125 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 TMEM178AQ8NBL3 297 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 OR13G1Q8NGZ3 307 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 MTCH2Q9Y6C9 303 aa11.51□□□□□ -0.57
COL6A3-206ENST00000409809 SYNGR2O43760 224 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 PPICP45877 212 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 WNT3P56703 355 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 MLF1P58340 268 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 GAB4Q2WGN9 574 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 ETFBKMTQ8IXQ9 262 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms