RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 TRRAPQ9Y4A5 3859 aa15.9■□□□□ 0.14
TSPAN4-209ENST00000409543 IRGMA1A4Y4 181 aa15.9■□□□□ 0.14
TSPAN4-209ENST00000409543 ODF3BA8MYP8 253 aa15.9■□□□□ 0.14
TSPAN4-209ENST00000409543 ARG1P05089 322 aa15.9■□□□□ 0.14
TSPAN4-209ENST00000409543 HCKP08631 526 aa15.9■□□□□ 0.14
TSPAN4-209ENST00000409543 PAX6P26367 422 aa15.9■□□□□ 0.14
TSPAN4-209ENST00000409543 OR3A1P47881 315 aa15.9■□□□□ 0.14
TSPAN4-209ENST00000409543 GTF2A1P52655 376 aaPredicted RBP15.9■□□□□ 0.14
TSPAN4-209ENST00000409543 KISS1Q15726 138 aa15.9■□□□□ 0.14
TSPAN4-209ENST00000409543 LRRC36Q1X8D7 754 aa15.9■□□□□ 0.14
TSPAN4-209ENST00000409543 CCDC58Q4VC31 144 aa15.9■□□□□ 0.14
TSPAN4-209ENST00000409543 TTC23Q5W5X9 447 aa15.9■□□□□ 0.14
TSPAN4-209ENST00000409543 ZNF626Q68DY1 528 aa15.9■□□□□ 0.14
TSPAN4-209ENST00000409543 RPL22L1Q6P5R6 122 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-209ENST00000409543 LHFPL4Q7Z7J7 247 aa15.9■□□□□ 0.14
TSPAN4-209ENST00000409543 TPRX1Q8N7U7 411 aa15.9■□□□□ 0.14
TSPAN4-209ENST00000409543 TSEN15Q8WW01 171 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-209ENST00000409543 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.9■□□□□ 0.14
TSPAN4-209ENST00000409543 VGLL3A8MV65 326 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 SIRPB1O00241 398 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 CLIC3O95833 236 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 OR2H2O95918 312 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 TMEM225BP0DP42 221 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 ETV1P50549 477 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 P2RX3P56373 397 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 ZP1P60852 638 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 LY6EQ16553 131 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 SLC35E4Q6ICL7 350 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 ZNF529Q6P280 563 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 TMPRSS11AQ6ZMR5 421 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 CNIH3Q8TBE1 160 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 PIFOQ8TCI5 191 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 RPS4Y2Q8TD47 263 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 CYGBQ8WWM9 190 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 FOXRED1Q96CU9 486 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 MALSU1Q96EH3 234 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 RAB18Q9NP72 206 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 FBLN5Q9UBX5 448 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 UBE2J1Q9Y385 318 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 SESN1Q9Y6P5 492 aa15.89■□□□□ 0.13
TSPAN4-209ENST00000409543 A0A0G2JK05 382 aa15.88■□□□□ 0.13
TSPAN4-209ENST00000409543 CDK5R1Q15078 307 aa15.88■□□□□ 0.13
TSPAN4-209ENST00000409543 LIAT1Q6ZQX7 453 aa15.88■□□□□ 0.13
TSPAN4-209ENST00000409543 CHST4Q8NCG5 386 aa15.88■□□□□ 0.13
TSPAN4-209ENST00000409543 SETD9Q8NE22 299 aa15.88■□□□□ 0.13
TSPAN4-209ENST00000409543 GPR148Q8TDV2 347 aa15.88■□□□□ 0.13
TSPAN4-209ENST00000409543 RGP1Q92546 391 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-209ENST00000409543 CPNE2Q96FN4 548 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-209ENST00000409543 DIMT1Q9UNQ2 313 aaKnown RBP15.88■□□□□ 0.13
TSPAN4-209ENST00000409543 MEGF8Q7Z7M0 2845 aa15.88■□□□□ 0.13
TSPAN4-209ENST00000409543 FUOMA2VDF0 154 aa15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 TIMM23O14925 209 aa15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 ZNF44P15621 663 aa15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 RAB3AP20336 220 aa15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 KIR2DS4P43632 304 aa15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 ADARB1P78563 741 aaKnown RBP15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 DYNC1I2Q13409 638 aaKnown RBP15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 IL18R1Q13478 541 aa15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 RCN1Q15293 331 aa15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 OR2G6Q5TZ20 316 aa15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 XAF1Q6GPH4 301 aa15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 Q6P435 159 aa15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 DYNAPQ8N1N2 210 aa15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 DHRSXQ8N5I4 330 aa15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 CORO2AQ92828 525 aa15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 TMEM133Q9H2Q1 129 aa15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 TCF7L1Q9HCS4 588 aa15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 BABAM2Q9NXR7 383 aa15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 EXOSC1Q9Y3B2 195 aaKnown RBP15.87■□□□□ 0.13
TSPAN4-209ENST00000409543 M0QZ24 198 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 MAGEB3O15480 346 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 OGG1O15527 345 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 CSN2P05814 226 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 CD2P06729 351 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 MYL12AP19105 171 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 GABRA5P31644 462 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 SOX2P48431 317 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 MTNR1BP49286 362 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 SCN1BQ07699 218 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 AESQ08117 197 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 SSX2Q16385 188 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 LDLRAD2Q5SZI1 272 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 ELP2Q6IA86 826 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 ASPHD2Q6ICH7 369 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 TRAPPC6BQ86SZ2 158 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 PXT1Q8NFP0 134 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 OR4C13Q8NGP0 309 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 CDCA4Q9BXL8 241 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 GAL3ST2Q9H3Q3 398 aa15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 RANBP3Q9H6Z4 567 aaPredicted RBP15.86■□□□□ 0.13
TSPAN4-209ENST00000409543 TRGV10A0A0A0MS01 117 aa15.85■□□□□ 0.13
TSPAN4-209ENST00000409543 IGHV2-26A0A0B4J1V2 119 aa15.85■□□□□ 0.13
TSPAN4-209ENST00000409543 SLC33A1O00400 549 aaPredicted RBP15.85■□□□□ 0.13
TSPAN4-209ENST00000409543 DEGS1O15121 323 aa15.85■□□□□ 0.13
TSPAN4-209ENST00000409543 GLIPR1P48060 266 aa15.85■□□□□ 0.13
TSPAN4-209ENST00000409543 MED21Q13503 144 aa15.85■□□□□ 0.13
TSPAN4-209ENST00000409543 MINOS1Q5TGZ0 78 aa15.85■□□□□ 0.13
TSPAN4-209ENST00000409543 DTX3Q8N9I9 347 aa15.85■□□□□ 0.13
TSPAN4-209ENST00000409543 OR51A2Q8NGJ7 313 aa15.85■□□□□ 0.13
TSPAN4-209ENST00000409543 TMEM80Q96HE8 168 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms