RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 GLAP06280 429 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 DANCRP0C864 163 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 AADACP22760 399 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 SNCAP37840 140 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 RBMXP38159 391 aaKnown RBP8.47□□□□□ -1.05
MSH2-202ENST00000406134 F2RL1P55085 397 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 PHLDA2Q53GA4 152 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 RIPPLY2Q5TAB7 128 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 Q6ZRG5 221 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 ZNF295-AS1Q8N0V1 137 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 RTN4IP1Q8WWV3 396 aaPredicted RBP8.47□□□□□ -1.05
MSH2-202ENST00000406134 TOMM40LQ969M1 308 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 ST3GAL6Q9Y274 331 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 LSM5Q9Y4Y9 91 aaKnown RBP8.47□□□□□ -1.05
MSH2-202ENST00000406134 PQLC2LA1A4F0 135 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 C1QL1O75973 258 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 CELA3AP09093 270 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 GNRHRP30968 328 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 HTR5AP47898 357 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 UCP3P55916 312 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 CARD18P57730 90 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 OR5L1Q8NGL2 311 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 PRRG4Q9BZD6 226 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 TREM1Q9NP99 234 aa8.47□□□□□ -1.05
MSH2-202ENST00000406134 PTPRZ1P23471 2315 aaPredicted RBP8.46□□□□□ -1.05
MSH2-202ENST00000406134 LCATP04180 440 aa8.46□□□□□ -1.05
MSH2-202ENST00000406134 CRYBA1P05813 215 aa8.46□□□□□ -1.05
MSH2-202ENST00000406134 ZNF728P0DKX0 622 aa8.46□□□□□ -1.05
MSH2-202ENST00000406134 NHLH2Q02577 135 aa8.46□□□□□ -1.05
MSH2-202ENST00000406134 TRA2AQ13595 282 aaKnown RBP eCLIP8.46□□□□□ -1.05
MSH2-202ENST00000406134 HABP2Q14520 560 aaPredicted RBP8.46□□□□□ -1.05
MSH2-202ENST00000406134 ARL6IP1Q15041 203 aa8.46□□□□□ -1.05
MSH2-202ENST00000406134 CNN3Q15417 329 aaKnown RBP8.46□□□□□ -1.05
MSH2-202ENST00000406134 CCDC157Q569K6 752 aa8.46□□□□□ -1.05
MSH2-202ENST00000406134 SPAG16Q8N0X2 631 aa8.46□□□□□ -1.05
MSH2-202ENST00000406134 SLC35G3Q8N808 338 aa8.46□□□□□ -1.05
MSH2-202ENST00000406134 SECTM1Q8WVN6 248 aa8.46□□□□□ -1.05
MSH2-202ENST00000406134 KCNE4Q8WWG9 221 aa8.46□□□□□ -1.05
MSH2-202ENST00000406134 MED13Q9UHV7 2174 aa8.46□□□□□ -1.05
MSH2-202ENST00000406134 NAPSAO96009 420 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 APOC1P02654 83 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 BTF3P20290 206 aaKnown RBP8.46□□□□□ -1.06
MSH2-202ENST00000406134 PAX6P26367 422 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 CD80P33681 288 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 HAGHLQ6PII5 290 aaPredicted RBP8.46□□□□□ -1.06
MSH2-202ENST00000406134 Q6ZS49 121 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 OR2V1Q8NHB1 315 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 YPEL4Q96NS1 127 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 RBM14Q96PK6 669 aaKnown RBP8.46□□□□□ -1.06
MSH2-202ENST00000406134 GPHA2Q96T91 129 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 PRDM14Q9GZV8 571 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 BOD1L1Q8NFC6 3051 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 TMEM265A0A087WTH1 108 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 IGKV1D-13A0A0B4J2D9 117 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 AGPAT2O15120 278 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 PDCD6O75340 191 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 IGKV1-13P0DP09 117 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 RAB13P51153 203 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 FXYD4P59646 89 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 TMEM171Q8WVE6 324 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 TMEM45BQ96B21 275 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 ZFP57Q9NU63 452 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 TCFL5Q9UL49 500 aa8.46□□□□□ -1.06
MSH2-202ENST00000406134 MRPS18CQ9Y3D5 142 aaKnown RBP8.46□□□□□ -1.06
MSH2-202ENST00000406134 DMXL1Q9Y485 3027 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 IGKV3D-15A0A087WSY6 115 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 LINC00587B1AMM8 73 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 JTBO76095 146 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 SNAPINO95295 136 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 TMEM50AO95807 157 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 F10P00742 488 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 KLK3P07288 261 aaPredicted RBP8.45□□□□□ -1.06
MSH2-202ENST00000406134 FOLR2P14207 255 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 P2RY1P47900 373 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 LHX2P50458 406 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 FUT6P51993 359 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 ZXDAP98168 799 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 C20orf204Q6ZNR8 217 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 AAED1Q7RTV5 226 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 ZNF611Q8N823 705 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 OR14L1PQ8NHC6 308 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 BOD1Q96IK1 185 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 KIRREL1Q96J84 757 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 AKR1E2Q96JD6 320 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 SGCZQ96LD1 299 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 S100A13Q99584 98 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 SPTBN2O15020 2390 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 C19orf67A6NJJ6 358 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 ZNF850A8MQ14 1090 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 LILRA1O75019 489 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 NEURL1O76050 574 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 IGHV3-9P01782 118 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 HOXB1P14653 301 aaPredicted RBP8.45□□□□□ -1.06
MSH2-202ENST00000406134 BCL3P20749 454 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 PMELP40967 661 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 FOLR3P41439 243 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 DVL1P1P54792 670 aaPredicted RBP8.45□□□□□ -1.06
MSH2-202ENST00000406134 TGIF1Q15583 401 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 BORCS8Q96FH0 119 aa8.45□□□□□ -1.06
MSH2-202ENST00000406134 SMOC1Q9H4F8 434 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms