RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 CHST4Q8NCG5 386 aa18.43■□□□□ 0.54
EPCAM-202ENST00000405271 NEDD4LQ96PU5 975 aa18.43■□□□□ 0.54
EPCAM-202ENST00000405271 FOXC2Q99958 501 aa18.43■□□□□ 0.54
EPCAM-202ENST00000405271 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.43■□□□□ 0.54
EPCAM-202ENST00000405271 RCC2Q9P258 522 aaKnown RBP18.43■□□□□ 0.54
EPCAM-202ENST00000405271 WIPI2Q9Y4P8 454 aa18.43■□□□□ 0.54
EPCAM-202ENST00000405271 PPIAL4AQ9Y536 164 aa18.43■□□□□ 0.54
EPCAM-202ENST00000405271 ITPR3Q14573 2671 aa18.42■□□□□ 0.54
EPCAM-202ENST00000405271 USF3Q68DE3 2245 aa18.42■□□□□ 0.54
EPCAM-202ENST00000405271 TRAV38-1A0A0B4J264 116 aa18.42■□□□□ 0.54
EPCAM-202ENST00000405271 OR2AT4A6NND4 320 aa18.42■□□□□ 0.54
EPCAM-202ENST00000405271 LGALS8O00214 317 aa18.42■□□□□ 0.54
EPCAM-202ENST00000405271 HAND1O96004 215 aa18.42■□□□□ 0.54
EPCAM-202ENST00000405271 GSTP1P09211 210 aaKnown RBP18.42■□□□□ 0.54
EPCAM-202ENST00000405271 HIST1H1DP16402 221 aaKnown RBP18.42■□□□□ 0.54
EPCAM-202ENST00000405271 COL8A2P25067 703 aa18.42■□□□□ 0.54
EPCAM-202ENST00000405271 PTH2RP49190 550 aa18.42■□□□□ 0.54
EPCAM-202ENST00000405271 HOXA4Q00056 320 aaPredicted RBP18.42■□□□□ 0.54
EPCAM-202ENST00000405271 ZNF79Q15937 498 aa18.42■□□□□ 0.54
EPCAM-202ENST00000405271 SIGIRRQ6IA17 410 aa18.42■□□□□ 0.54
EPCAM-202ENST00000405271 Q6ZTK2 550 aa18.42■□□□□ 0.54
EPCAM-202ENST00000405271 DTX3Q8N9I9 347 aa18.42■□□□□ 0.54
EPCAM-202ENST00000405271 MBD6Q96DN6 1003 aa18.42■□□□□ 0.54
EPCAM-202ENST00000405271 ZNF701Q9NV72 531 aaPredicted RBP18.42■□□□□ 0.54
EPCAM-202ENST00000405271 OR14J1Q9UGF5 321 aa18.42■□□□□ 0.54
EPCAM-202ENST00000405271 PRRC2AP48634 2157 aaKnown RBP18.42■□□□□ 0.54
EPCAM-202ENST00000405271 A0A0G2JMP0 313 aa18.41■□□□□ 0.54
EPCAM-202ENST00000405271 A0A0X1KG70 313 aa18.41■□□□□ 0.54
EPCAM-202ENST00000405271 MFNGO00587 321 aa18.41■□□□□ 0.54
EPCAM-202ENST00000405271 PSG2P11465 335 aa18.41■□□□□ 0.54
EPCAM-202ENST00000405271 ZNF44P15621 663 aa18.41■□□□□ 0.54
EPCAM-202ENST00000405271 PAX1P15863 534 aa18.41■□□□□ 0.54
EPCAM-202ENST00000405271 FUT3P21217 361 aa18.41■□□□□ 0.54
EPCAM-202ENST00000405271 DUSP1P28562 367 aa18.41■□□□□ 0.54
EPCAM-202ENST00000405271 TMEM50BP56557 158 aa18.41■□□□□ 0.54
EPCAM-202ENST00000405271 ZNF260Q3ZCT1 412 aa18.41■□□□□ 0.54
EPCAM-202ENST00000405271 PLAC9Q5JTB6 97 aa18.41■□□□□ 0.54
EPCAM-202ENST00000405271 FAM201AQ5SY85 155 aa18.41■□□□□ 0.54
EPCAM-202ENST00000405271 Q6P435 159 aa18.41■□□□□ 0.54
EPCAM-202ENST00000405271 PEG10Q86TG7 708 aaKnown RBP18.41■□□□□ 0.54
EPCAM-202ENST00000405271 OR4M2Q8NGB6 313 aa18.41■□□□□ 0.54
EPCAM-202ENST00000405271 SEH1LQ96EE3 360 aa18.41■□□□□ 0.54
EPCAM-202ENST00000405271 ARHGAP5-AS1Q96IT6 56 aa18.41■□□□□ 0.54
EPCAM-202ENST00000405271 PECRQ9BY49 303 aa18.41■□□□□ 0.54
EPCAM-202ENST00000405271 CHODLQ9H9P2 273 aa18.41■□□□□ 0.54
EPCAM-202ENST00000405271 IGHV3OR15-7A0A075B7D8 119 aa18.4■□□□□ 0.54
EPCAM-202ENST00000405271 RFPL4AA6NLU0 287 aa18.4■□□□□ 0.54
EPCAM-202ENST00000405271 RFPL4AL1F8VTS6 287 aa18.4■□□□□ 0.54
EPCAM-202ENST00000405271 DEGS1O15121 323 aa18.4■□□□□ 0.54
EPCAM-202ENST00000405271 CTDSPLO15194 276 aa18.4■□□□□ 0.54
EPCAM-202ENST00000405271 OR2H2O95918 312 aa18.4■□□□□ 0.54
EPCAM-202ENST00000405271 HLA-DQB1P01920 261 aa18.4■□□□□ 0.54
EPCAM-202ENST00000405271 GLAP06280 429 aa18.4■□□□□ 0.54
EPCAM-202ENST00000405271 CD40LGP29965 261 aa18.4■□□□□ 0.54
EPCAM-202ENST00000405271 RBMXP38159 391 aaKnown RBP18.4■□□□□ 0.54
EPCAM-202ENST00000405271 MRPS10P82664 201 aaKnown RBP18.4■□□□□ 0.54
EPCAM-202ENST00000405271 MADCAM1Q13477 382 aa18.4■□□□□ 0.54
EPCAM-202ENST00000405271 KCNJ8Q15842 424 aa18.4■□□□□ 0.54
EPCAM-202ENST00000405271 NKAPLQ5M9Q1 402 aa18.4■□□□□ 0.54
EPCAM-202ENST00000405271 ATAD3CQ5T2N8 411 aa18.4■□□□□ 0.54
EPCAM-202ENST00000405271 STUMQ69YW2 141 aa18.4■□□□□ 0.54
EPCAM-202ENST00000405271 SFRP4Q6FHJ7 346 aaPredicted RBP18.4■□□□□ 0.54
EPCAM-202ENST00000405271 SRRQ9GZT4 340 aa18.4■□□□□ 0.54
EPCAM-202ENST00000405271 AUNIPQ9H7T9 357 aa18.4■□□□□ 0.54
EPCAM-202ENST00000405271 BARX1Q9HBU1 254 aaPredicted RBP18.4■□□□□ 0.54
EPCAM-202ENST00000405271 PLEKHJ1Q9NW61 149 aa18.4■□□□□ 0.54
EPCAM-202ENST00000405271 MRPS7Q9Y2R9 242 aaKnown RBP18.4■□□□□ 0.54
EPCAM-202ENST00000405271 VPS13CQ709C8 3753 aa18.4■□□□□ 0.54
EPCAM-202ENST00000405271 SERPINE3A8MV23 424 aa18.39■□□□□ 0.54
EPCAM-202ENST00000405271 LY6HO94772 140 aa18.39■□□□□ 0.54
EPCAM-202ENST00000405271 LMO1P25800 156 aa18.39■□□□□ 0.54
EPCAM-202ENST00000405271 BTG1P62324 171 aa18.39■□□□□ 0.54
EPCAM-202ENST00000405271 PNLIPRP3Q17RR3 467 aa18.39■□□□□ 0.54
EPCAM-202ENST00000405271 ANGPTL6Q8NI99 470 aa18.39■□□□□ 0.54
EPCAM-202ENST00000405271 TIMD4Q96H15 378 aa18.39■□□□□ 0.54
EPCAM-202ENST00000405271 ABHD1Q96SE0 405 aa18.39■□□□□ 0.54
EPCAM-202ENST00000405271 DNTTIP1Q9H147 329 aa18.39■□□□□ 0.54
EPCAM-202ENST00000405271 ZNF581Q9P0T4 197 aa18.39■□□□□ 0.54
EPCAM-202ENST00000405271 ZNF222Q9UK12 451 aa18.39■□□□□ 0.54
EPCAM-202ENST00000405271 IGKV1D-17A0A075B6S4 117 aa18.39■□□□□ 0.53
EPCAM-202ENST00000405271 LYNX1G3V0Z9 82 aa18.39■□□□□ 0.53
EPCAM-202ENST00000405271 NDUFS7O75251 213 aa18.39■□□□□ 0.53
EPCAM-202ENST00000405271 CA11O75493 328 aa18.39■□□□□ 0.53
EPCAM-202ENST00000405271 LYNX1P0DP58 116 aa18.39■□□□□ 0.53
EPCAM-202ENST00000405271 PPP5CP53041 499 aa18.39■□□□□ 0.53
EPCAM-202ENST00000405271 SCN1BQ07699 218 aa18.39■□□□□ 0.53
EPCAM-202ENST00000405271 PDCD1Q15116 288 aa18.39■□□□□ 0.53
EPCAM-202ENST00000405271 DEFB113Q30KQ7 82 aa18.39■□□□□ 0.53
EPCAM-202ENST00000405271 CDNFQ49AH0 187 aa18.39■□□□□ 0.53
EPCAM-202ENST00000405271 C6orf201Q7Z4U5 140 aa18.39■□□□□ 0.53
EPCAM-202ENST00000405271 SNX29P2Q8IUI4 249 aa18.39■□□□□ 0.53
EPCAM-202ENST00000405271 GDPD1Q8N9F7 314 aa18.39■□□□□ 0.53
EPCAM-202ENST00000405271 C19orf18Q8NEA5 215 aa18.39■□□□□ 0.53
EPCAM-202ENST00000405271 ST8SIA4Q92187 359 aa18.39■□□□□ 0.53
EPCAM-202ENST00000405271 TMEM235A6NFC5 223 aa18.38■□□□□ 0.53
EPCAM-202ENST00000405271 NKX6-3A6NJ46 265 aa18.38■□□□□ 0.53
EPCAM-202ENST00000405271 SIRPB1O00241 398 aa18.38■□□□□ 0.53
EPCAM-202ENST00000405271 SLC33A1O00400 549 aaPredicted RBP18.38■□□□□ 0.53
EPCAM-202ENST00000405271 IGHV4-39P01824 125 aa18.38■□□□□ 0.53
EPCAM-202ENST00000405271 MELTFP08582 738 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms