RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 MGMTP16455 207 aa24.35■■□□□ 1.49
USP42-202ENST00000404008 ZNF16P17020 682 aaPredicted RBP24.35■■□□□ 1.49
USP42-202ENST00000404008 RANBP1P43487 201 aa24.35■■□□□ 1.49
USP42-202ENST00000404008 TMEM185AQ8NFB2 350 aa24.35■■□□□ 1.49
USP42-202ENST00000404008 ST8SIA4Q92187 359 aa24.35■■□□□ 1.49
USP42-202ENST00000404008 FAM46BQ96A09 425 aa24.35■■□□□ 1.49
USP42-202ENST00000404008 MALRD1Q5VYJ5 2156 aa24.35■■□□□ 1.49
USP42-202ENST00000404008 ABCA1O95477 2261 aa24.34■■□□□ 1.49
USP42-202ENST00000404008 OR10K2Q6IF99 312 aa24.34■■□□□ 1.49
USP42-202ENST00000404008 SFXN4Q6P4A7 337 aa24.34■■□□□ 1.49
USP42-202ENST00000404008 LINC00596Q86U02 117 aa24.34■■□□□ 1.49
USP42-202ENST00000404008 BIVMQ86UB2 503 aa24.34■■□□□ 1.49
USP42-202ENST00000404008 CLVS1Q8IUQ0 354 aaPredicted RBP24.34■■□□□ 1.49
USP42-202ENST00000404008 OR51D1Q8NGF3 324 aa24.34■■□□□ 1.49
USP42-202ENST00000404008 KCNG3Q8TAE7 436 aa24.34■■□□□ 1.49
USP42-202ENST00000404008 FAM3DQ96BQ1 224 aa24.34■■□□□ 1.49
USP42-202ENST00000404008 FAM234AQ9H0X4 552 aa24.34■■□□□ 1.49
USP42-202ENST00000404008 ARHGAP32A7KAX9 2087 aa24.34■■□□□ 1.49
USP42-202ENST00000404008 TMEM82A0PJX8 343 aa24.33■■□□□ 1.49
USP42-202ENST00000404008 TMEM14DPA8MWL7 114 aa24.33■■□□□ 1.49
USP42-202ENST00000404008 K7N7A8 449 aa24.33■■□□□ 1.49
USP42-202ENST00000404008 SIRPB1O00241 398 aa24.33■■□□□ 1.49
USP42-202ENST00000404008 GEMIN2O14893 280 aaKnown RBP24.33■■□□□ 1.49
USP42-202ENST00000404008 GPR37O15354 613 aa24.33■■□□□ 1.49
USP42-202ENST00000404008 CD5LO43866 347 aa24.33■■□□□ 1.49
USP42-202ENST00000404008 TK1P04183 234 aa24.33■■□□□ 1.49
USP42-202ENST00000404008 SLC2A2P11168 524 aaPredicted RBP24.33■■□□□ 1.49
USP42-202ENST00000404008 LMO1P25800 156 aa24.33■■□□□ 1.49
USP42-202ENST00000404008 SCN1BQ07699 218 aa24.33■■□□□ 1.49
USP42-202ENST00000404008 UNC119Q13432 240 aa24.33■■□□□ 1.49
USP42-202ENST00000404008 PDCD1Q15116 288 aa24.33■■□□□ 1.49
USP42-202ENST00000404008 C17orf107Q6ZR85 190 aa24.33■■□□□ 1.49
USP42-202ENST00000404008 ASCC1Q8N9N2 400 aaKnown RBP24.33■■□□□ 1.49
USP42-202ENST00000404008 SELENOIQ9C0D9 397 aa24.33■■□□□ 1.49
USP42-202ENST00000404008 LIN7BQ9HAP6 207 aa24.33■■□□□ 1.49
USP42-202ENST00000404008 DEGS1O15121 323 aa24.32■■□□□ 1.48
USP42-202ENST00000404008 TGFAP01135 160 aa24.32■■□□□ 1.48
USP42-202ENST00000404008 IL1AP01583 271 aa24.32■■□□□ 1.48
USP42-202ENST00000404008 ZNF44P15621 663 aa24.32■■□□□ 1.48
USP42-202ENST00000404008 RPS19P39019 145 aaKnown RBP24.32■■□□□ 1.48
USP42-202ENST00000404008 C2orf76Q3KRA6 126 aa24.32■■□□□ 1.48
USP42-202ENST00000404008 OR2W3Q7Z3T1 314 aa24.32■■□□□ 1.48
USP42-202ENST00000404008 CHST4Q8NCG5 386 aa24.32■■□□□ 1.48
USP42-202ENST00000404008 Q96M66 194 aa24.32■■□□□ 1.48
USP42-202ENST00000404008 SHARPINQ9H0F6 387 aa24.32■■□□□ 1.48
USP42-202ENST00000404008 IFT22Q9H7X7 185 aa24.32■■□□□ 1.48
USP42-202ENST00000404008 FBLN5Q9UBX5 448 aa24.32■■□□□ 1.48
USP42-202ENST00000404008 OR5V1Q9UGF6 321 aa24.32■■□□□ 1.48
USP42-202ENST00000404008 TRAV20A0A0B4J274 112 aa24.31■■□□□ 1.48
USP42-202ENST00000404008 SLC33A1O00400 549 aaPredicted RBP24.31■■□□□ 1.48
USP42-202ENST00000404008 PSPNO60542 156 aa24.31■■□□□ 1.48
USP42-202ENST00000404008 MPIG6BO95866 241 aa24.31■■□□□ 1.48
USP42-202ENST00000404008 LY6G6DO95868 133 aa24.31■■□□□ 1.48
USP42-202ENST00000404008 SERPINB10P48595 397 aa24.31■■□□□ 1.48
USP42-202ENST00000404008 PAX2Q02962 417 aa24.31■■□□□ 1.48
USP42-202ENST00000404008 MPV17LQ2QL34 196 aa24.31■■□□□ 1.48
USP42-202ENST00000404008 C11orf91Q3C1V1 193 aa24.31■■□□□ 1.48
USP42-202ENST00000404008 TMEM186Q96B77 213 aa24.31■■□□□ 1.48
USP42-202ENST00000404008 SNX22Q96L94 193 aa24.31■■□□□ 1.48
USP42-202ENST00000404008 TMEM59Q9BXS4 323 aa24.31■■□□□ 1.48
USP42-202ENST00000404008 ZNF581Q9P0T4 197 aa24.31■■□□□ 1.48
USP42-202ENST00000404008 DAPK2Q9UIK4 370 aa24.31■■□□□ 1.48
USP42-202ENST00000404008 LOC105371242A0A075B767 164 aa24.3■■□□□ 1.48
USP42-202ENST00000404008 LDLRAD4O15165 306 aa24.3■■□□□ 1.48
USP42-202ENST00000404008 NDUFB7P17568 137 aa24.3■■□□□ 1.48
USP42-202ENST00000404008 GABRR1P24046 479 aa24.3■■□□□ 1.48
USP42-202ENST00000404008 DVL1P1P54792 670 aaPredicted RBP24.3■■□□□ 1.48
USP42-202ENST00000404008 TMBIM6P55061 237 aa24.3■■□□□ 1.48
USP42-202ENST00000404008 TAF9Q16594 264 aa24.3■■□□□ 1.48
USP42-202ENST00000404008 CD276Q5ZPR3 534 aa24.3■■□□□ 1.48
USP42-202ENST00000404008 BTN2A1Q7KYR7 527 aa24.3■■□□□ 1.48
USP42-202ENST00000404008 GLCCI1Q86VQ1 547 aa24.3■■□□□ 1.48
USP42-202ENST00000404008 OR8H2Q8N162 312 aa24.3■■□□□ 1.48
USP42-202ENST00000404008 SVEP1Q4LDE5 3571 aa24.3■■□□□ 1.48
USP42-202ENST00000404008 TLN2Q9Y4G6 2542 aa24.3■■□□□ 1.48
USP42-202ENST00000404008 A0A0B4J203 849 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 PPIAL4CA0A0B4J2A2 164 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 C22orf46C9J442 243 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 OR7C1O76099 320 aaPredicted RBP24.29■■□□□ 1.48
USP42-202ENST00000404008 ECDO95905 644 aaPredicted RBP24.29■■□□□ 1.48
USP42-202ENST00000404008 OR3A1P47881 315 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 RPS27AP62979 156 aaKnown RBP24.29■■□□□ 1.48
USP42-202ENST00000404008 RAB2BQ8WUD1 216 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 DACT3Q96B18 629 aaPredicted RBP24.29■■□□□ 1.48
USP42-202ENST00000404008 CHST6Q9GZX3 395 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 MMP26Q9NRE1 261 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 HIF1ANQ9NWT6 349 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 CSPG4Q6UVK1 2322 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 TRAV24A0A0B4J272 114 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 TMEM272A0A1B0GTI8 110 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 FAM90A10PA6NDY2 464 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 FAM90A18PA6NE21 464 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 FAM90A16PA6NEW6 464 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 FAM90A20PA6NIJ5 464 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 FAM90A8PA6NJQ4 464 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 FAM90A7PA6NKC0 464 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 FAM90A22PA8MWA6 464 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 FAM90A12PA8MX19 464 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 FAM90A5PA8MXJ8 464 aa24.29■■□□□ 1.48
USP42-202ENST00000404008 FAM90A23PA8MXZ1 464 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms