RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 A0A1W2PNV4 684 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 CENPBD1B2RD01 187 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 LRRN3E7EW58 273 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 H3BN98 237 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 K7EM74 188 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 SULT2B1O00204 365 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 KPNA4O00629 521 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 PLPP3O14495 311 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 BHLHE40O14503 412 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 BCKDKO14874 412 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 GMFGO60234 142 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 TRAPPC6AO75865 159 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 IGHMP01871 453 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 CD14P08571 375 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 POU2F1P14859 743 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 CPN1P15169 458 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZNF708P17019 499 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZNF24P17028 368 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 GTF2E2P29084 291 aaKnown RBP3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 GRPRP30550 384 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 GGT2P36268 569 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 RPS5P46782 204 aaKnown RBP3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 LHX2P50458 406 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 CLDN18P56856 261 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 FXYD6P3P58550 94 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 CDC42P60953 191 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 CXCR4P61073 352 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 SNRPGP62308 76 aaKnown RBP3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 SLC35A1P78382 337 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 H3F3AP84243 136 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 SCGB2A2Q13296 93 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 MED21Q13503 144 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 PDK3Q15120 406 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 PTGES3Q15185 160 aaKnown RBP3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 TMEM176BQ3YBM2 270 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 LINC01620Q4KN68 170 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 FAM120AOSQ5T036 256 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZNF691Q5VV52 312 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 C12orf73Q69YU5 71 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 ASPHD2Q6ICH7 369 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 NIPAL3Q6P499 406 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 CASP12Q6UXS9 341 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 NANOGNBQ7Z5D8 188 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZNF525Q8N782 197 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 LRRC75AQ8NAA5 344 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR2T33Q8NG76 320 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR52L1Q8NGH7 329 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR8J1Q8NGP2 316 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR13C2Q8NGS9 318 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR2V1Q8NHB1 315 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 NEIL3Q8TAT5 605 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 FANK1Q8TC84 345 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 CYGBQ8WWM9 190 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 CPNE4Q96A23 557 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZHX1-C8orf76Q96EF9 292 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR5B2Q96R09 309 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 MBOAT4Q96T53 435 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 APOL4Q9BPW4 351 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 TSSK6Q9BXA6 273 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 YTHDF1Q9BYJ9 559 aaKnown RBP3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR11A1Q9GZK7 315 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 RIBC2Q9H4K1 309 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 RNF122Q9H9V4 155 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 MCCC2Q9HCC0 563 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 EHFQ9NZC4 300 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 DPM3Q9P2X0 92 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 MOKQ9UQ07 419 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 RASD1Q9Y272 281 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 TP53TG5Q9Y2B4 290 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 GMPPBQ9Y5P6 360 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 USP24Q9UPU5 2620 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 BOD1L1Q8NFC6 3051 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 TRAV27A0A087WT01 109 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 A6NIZ1 184 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 FAM166BA8MTA8 275 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 M0R3G1 203 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 SMPD2O60906 423 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 SOX14O95416 240 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 IFNGP01579 166 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 POLR2IP36954 125 aaKnown RBP3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 RFC3P40938 356 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 AQP2P41181 271 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 DAP3P51398 398 aaKnown RBP3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 P2RY4P51582 365 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 SUCLG1P53597 346 aaKnown RBP3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 CARD18P57730 90 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR2B6P58173 313 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 RAP1BP61224 184 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 RAP1AP62834 184 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 RPL8P62917 257 aaKnown RBP3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 RPL18Q07020 188 aaKnown RBP3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 KLRB1Q12918 225 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZNF154Q13106 437 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 PMS2P3Q13401 168 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 TMED1Q13445 227 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 GINS1Q14691 196 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR7A5Q15622 319 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 PGGHGQ32M88 737 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 C6orf52Q5T4I8 152 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 TMEM225Q6GV28 225 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms