RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 EXTL1Q92935 676 aa15.21■□□□□ 0.03
HLA-DQB1-204ENST00000399084 SLX1AQ9BQ83 275 aa15.21■□□□□ 0.03
HLA-DQB1-204ENST00000399084 RSRP1Q9BUV0 290 aa15.21■□□□□ 0.03
HLA-DQB1-204ENST00000399084 PARD6AQ9NPB6 346 aa15.21■□□□□ 0.03
HLA-DQB1-204ENST00000399084 GLS2Q9UI32 602 aa15.21■□□□□ 0.03
HLA-DQB1-204ENST00000399084 NGFP01138 241 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 SELEP16581 610 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 NPBWR2P48146 333 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 SMCO1Q147U7 214 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 C3AR1Q16581 482 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 ATP1A1-AS1Q5TC04 95 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 FAM214BQ7L5A3 538 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 BAP18Q8IXM2 172 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 C1orf162Q8NEQ5 155 aaPredicted RBP15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 SARAFQ96BY9 339 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 OR10C1Q96KK4 312 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 CNTNAP3BQ96NU0 1288 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 CNTNAP3Q9BZ76 1288 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 H7C1Q1 480 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 DIRAS3O95661 229 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 TK1P04183 234 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 BCL3P20749 454 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 EIF2S3P41091 472 aaKnown RBP15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 PRSS12P56730 875 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 UBE2NP61088 152 aaKnown RBP15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 ATXN7L3Q14CW9 347 aaPredicted RBP15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 OR2A2Q6IF42 318 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 LGI3Q8N145 548 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 WDR13Q9H1Z4 485 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 C12orf49Q9H741 205 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 Q9N2K0 584 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 MTCH1Q9NZJ7 389 aa15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 FBXO9Q9UK97 447 aaPredicted RBP15.2■□□□□ 0.02
HLA-DQB1-204ENST00000399084 MUC6Q6W4X9 2439 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 H0YIZ8 118 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 NKX2-8O15522 239 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 CCL2P13500 99 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 WNT5AP41221 380 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 CCL11P51671 97 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 RND3P61587 244 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 TMEM187Q14656 261 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 GUSBP1Q15486 140 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 IAH1Q2TAA2 248 aaPredicted RBP15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 HIKESHIQ53FT3 197 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 Q6ZT83 130 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 MDP1Q86V88 176 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 C1orf174Q8IYL3 243 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 BVESQ8NE79 360 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 WNT2BQ93097 391 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 SLAMF9Q96A28 289 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 PLEKHA2Q9HB19 425 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 TREM2Q9NZC2 230 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 KCNMB2Q9Y691 235 aa15.19■□□□□ 0.02
HLA-DQB1-204ENST00000399084 CEACAM4O75871 244 aa15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 HOXB5P09067 269 aa15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 ACAA1P09110 424 aaPredicted RBP15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 RAC2P15153 192 aa15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 ZNF14P17017 642 aaPredicted RBP15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 DAZAP2Q15038 168 aaPredicted RBP15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 FAM76BQ5HYJ3 339 aa15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 LIAT1Q6ZQX7 453 aa15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 FDCSPQ8NFU4 85 aa15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 PCNPQ8WW12 178 aaKnown RBP15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 MICU1Q9BPX6 476 aa15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 RTL8AQ9BWD3 113 aa15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 PIGMQ9H3S5 423 aa15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 LIME1Q9H400 295 aa15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 SLC2A9Q9NRM0 540 aa15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 TMED3Q9Y3Q3 217 aa15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 ARHGAP21Q5T5U3 1957 aa15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 FRYLO94915 3013 aa15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 VPS13AQ96RL7 3174 aa15.18■□□□□ 0.02
HLA-DQB1-204ENST00000399084 SPAARA0A1B0GVQ0 90 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 ZNF891A8MT65 544 aaPredicted RBP15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 AHRRA9YTQ3 701 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 J3QT63 122 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 RAB32Q13637 225 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 UQCC3Q6UW78 93 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 STPG2Q8N412 459 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 RNF141Q8WVD5 230 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 CXorf58Q96LI9 332 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 FGF23Q9GZV9 251 aaPredicted RBP15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 OR51I2Q9H344 312 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 CDH20Q9HBT6 801 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 POLDIP2Q9Y2S7 368 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 ATP23Q9Y6H3 246 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 FREM1Q5H8C1 2179 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 DNAJC13O75165 2243 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 ZNF407Q9C0G0 2248 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 TRDCB7Z8K6 153 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 FGF16O43320 207 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 PPYP01298 95 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 ZNF250P15622 560 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 MDH2P40926 338 aaKnown RBP15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 GABRA6Q16445 453 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 GGNBP1Q5YKI7 109 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 TOMM40LQ969M1 308 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 OBP2BQ9NPH6 170 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 TMEM100Q9NV29 134 aa15.17■□□□□ 0.02
HLA-DQB1-204ENST00000399084 GSKIPQ9P0R6 139 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms